| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6088 |
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| Symbol | |
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| ID | 6279819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2326468 |
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| End bp | 2327418 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617148 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001889791 |
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| Protein GI | 187920759 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.750919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGCC AACCTACCAA TCCCCACCAT GTTCCTCACG CCGGCACGGA GCTGTACGAC
GTGCGCCGCG ACGAACTGGT CGTCGAGCCT GCGCCTGTCG AAGTGGCGCC GCTGAAACAG
GGCGTGTTCA AACGTCTCGT GCACCGCTTT TCCGTACTCG GCCTGATCGG TCTGCTGATG
GTGGCGTTCT GGCTGCTGGT CGCGTTCATC GGGCCGCTGG TCGCGCCGTA TAAAGGCGGC
GCGCTGACCT CGACGGAAAT TTTCGGCCGT TACAGCGCGG CGTATCCGCT TGGCACCGAC
TATCTCGGCC GCGACATGCT GAGCCGGATT CTCTACGGCG CGCGCTACAC CGTCGGCCTC
GCGCTCGCTG CAGCAGTGCT CGCGAGTGTG ATCGGCACGT TCTTCGGGCT GCTCGCGGCG
GTGTCGGGCC GTGTGGTCGA TGAAATTCTG AGCCGCCTGT TCGACGCGCT GATTTCGATT
CCGAGCAAGG TGCTCGCGCT CGTCGTGATC GCCGCGTTCG GGTCGTCGAT TCCGATGCTG
ACGACGGTCG CCGCGGCCGC CTACATTCCC GGCGCGTTCC GCATTTCGCG CTCGCTCGCG
GTGAACGTGA TGAGCCTCGA ATACGTGCAG GTGGCTCGGG CGCGCGGCGA AGGCATCTTC
TATATTGCGC GGGTCGAGGT GCTGCCCAAC ATGATCCATC CGATGCTCGC CGATTTCGGC
CTGCGCTTCG TGTTCATCGT GCTGCTGCTG AGCGGGTTGA GCTTCCTCGG CCTCGGCGTG
CAACCGCCGA ACGCCGATTG GGGTTCGCTC GTGCGCGAGA ACATCGGCGG CTTGTCGGAA
GGCGCGCCCG CCGTGCTGAT GCCGGCCATC GCGATCGCGA CGCTGACCAT CGGCATGAAT
CTGCTGATCG ACAACTTGCG GCGTCGCAGC CGCAAGCATG GAGGTGCGTG A
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| Protein sequence | MMSQPTNPHH VPHAGTELYD VRRDELVVEP APVEVAPLKQ GVFKRLVHRF SVLGLIGLLM
VAFWLLVAFI GPLVAPYKGG ALTSTEIFGR YSAAYPLGTD YLGRDMLSRI LYGARYTVGL
ALAAAVLASV IGTFFGLLAA VSGRVVDEIL SRLFDALISI PSKVLALVVI AAFGSSIPML
TTVAAAAYIP GAFRISRSLA VNVMSLEYVQ VARARGEGIF YIARVEVLPN MIHPMLADFG
LRFVFIVLLL SGLSFLGLGV QPPNADWGSL VRENIGGLSE GAPAVLMPAI AIATLTIGMN
LLIDNLRRRS RKHGGA
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