| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6071 |
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| Symbol | |
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| ID | 6278579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2308277 |
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| End bp | 2309737 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617131 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001889774 |
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| Protein GI | 187920742 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.362565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0749065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCGT ACGTGTGTCC TGCCACCCGC GTTATGGCAA TCGCCATCGC GGTGACTTTA
CTCGCCGGCT GCACGACGTT CTCGAAGGAC GGCGGTTTCG GCACCGTGTC GAGCGCCGCA
TCCGAACGAC TCGGTAAAGA TGCCGTGCTG ATCAAGACCG ACGACGACCG GAGCGCCATC
GCCAAACGCA CGCAGGAACT CCTTTCCGCG CCGCTCGGCA TGGACGACGC AGTCCAGATC
GCGCTCCTGA ACAATCGCGG TTTGCAGGCG TCGTACAGCG AGTTGGGCAT TGCCGAAGCG
GACCTCGTTC AGGCGGGCCG TTTGCCGAAT CCCGGCTTTT CGTTTAGCCG CACGCATGGT
GGGGATGACT TGAGCATCAG CCGCACGTTC ACGCTCGGCA TGTTGCGCGT ATTGACGATG
CCGTTGACGA CGCGCATCGA AAGCCGTCGC TTCGCGCAGA CCCGCTTGCT TGCCGCCAAC
ACCATGCTCG AGGTCGCCGC CGATGCGCGG CGCGCCTACA TCCGCGCAGT CGCTGCCAAG
CAATCGGCCG CCTACGCGGA GCAGGTGAAA GACTCGGCCG AGGCCAGCGC CGAACTCGCT
CGGCGCATGC AGCAGGCCGG CAACTTCAGC AAGCTCGATT ACGCACGAGA GCAGGCCTTC
TACGCGGATG CGATGGCGCA ACTGGCAAGA GCGCGTCAAC AGTCGGTGTC CGCGCAGGAA
AAGCTCACTC GCGTGATGGG TCTCTGGGGT TCGCAAGCGC ACTACGCGTT GCCCGAGCGT
CTGCCGGATC TGCCTGCCAC ACGCCCAGAG CTGCACGATC TGGAAACCTT CGCGATGCAA
AACAGGCTCG ATATCCAGGC CGCGAAATTG CAAACGCAAA GCGTCGCCAG TTCACTGGGT
TTGAGTCAGG CAACGCGTTT CATCAACGTG CTGGACGTCG GCTATCAGAA CAATTTCACG
ACTTCCGACG GACGCGAGCA AGGCTATGAA ATCAGCGTGG AGATTCCGCT TTTCGACTGG
GGCAGCGCCA AAGTGGCGCG CGCTGAAGCG ATCTATATGC AGTCGGCGAA TCGCTTCGCC
GGGACCGCGA TCAACGCGCG CTCCGAAGTG CGTGAAGCGT ATTCGACCTA CGTCTCCGGC
TACGACCTCG CGAAGCACTA TCGCGACGAA GTCGTGCCGC TGCGCAAAAC CATCTCCGAT
GAACTGCTGC TTCGCTATAA CGGCATGCTC GCAAGCGTGT TCGAACTGCT CGCGGATTCA
CGCGACCAGA TCGGCGCGGT GAATAGCGCC ATCGACGCGC TGAAGGACTA CTGGCTCGCA
CAGACCGATT TGCAACAGGC GCTCGGCGGC CGTCTGCCTG CTGGCGCCGA CGCGGCGCCG
CTCGCATCCG CGACGACGCA AGCGGTGTCT TCCACTGAAT CCAAAGAATC CGAAGAATCC
AAAGAATCCG AAGGTCAATG A
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| Protein sequence | MRPYVCPATR VMAIAIAVTL LAGCTTFSKD GGFGTVSSAA SERLGKDAVL IKTDDDRSAI
AKRTQELLSA PLGMDDAVQI ALLNNRGLQA SYSELGIAEA DLVQAGRLPN PGFSFSRTHG
GDDLSISRTF TLGMLRVLTM PLTTRIESRR FAQTRLLAAN TMLEVAADAR RAYIRAVAAK
QSAAYAEQVK DSAEASAELA RRMQQAGNFS KLDYAREQAF YADAMAQLAR ARQQSVSAQE
KLTRVMGLWG SQAHYALPER LPDLPATRPE LHDLETFAMQ NRLDIQAAKL QTQSVASSLG
LSQATRFINV LDVGYQNNFT TSDGREQGYE ISVEIPLFDW GSAKVARAEA IYMQSANRFA
GTAINARSEV REAYSTYVSG YDLAKHYRDE VVPLRKTISD ELLLRYNGML ASVFELLADS
RDQIGAVNSA IDALKDYWLA QTDLQQALGG RLPAGADAAP LASATTQAVS STESKESEES
KESEGQ
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