| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6063 |
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| Symbol | |
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| ID | 6277651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2300471 |
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| End bp | 2301319 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617123 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_001889766 |
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| Protein GI | 187920734 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0849637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT CCGACGCCTC TTCTTTTTCC ACCTCGCTGG ATGAAGGCCT CAGCGGCGCC
ACGCGGGTGG TTTTCATCGT CGGCGATCCC ATTGCGCAGG TCCGCTCGCC GTCCGGCGTG
ACCGCGGCTT TGCGCGCAGC CGGACGCGAT GCGCTGGTGG TCCCCGCGCA CGTGGCGCCC
GCCGATTTGC CCGCGTTTTT TGCAGGCGTG ACGCCCATGC GCAATGTCGA CGGCGTGATC
ATTACCGTGC CCCACAAGTT CAGCGCCATC AAGTATTGCG GCTCGCTCAC CGAGCAGGCG
AGCTTTCTCG GCGCGGTCAA CACCTTGCGT CGCACGGCGG ACGGCAACTG GCACGGTGGC
ATGTTCGACG GCACCGGTTT CGTCGCGGCG CTCGTCGATG CAGGCTGCGA TCTGCGTGGC
AAGCATGCGC TGCTGGTCGG CGCGGGCGGC GCGGGTTGCG CGATCGGCCA TGCGCTAGTG
CAAGGCGGCG TGGCGTCGCT CGACGTGCGC GATAACGATG CTGAACGCAC GGCGTCGCTG
ATCGGCCGGT TGAATGCGCT GCGACAAGGT GAAGTGCGCA GCGCGGCTGC TTCCGTGGAC
GCCAGTACTT ACGATGTCGT GATCAATGCA TCACCGCTCG GCATGCGTGC GGACGACCCA
CTGCCTCTCG ACGTATCGCG TTTGCCGGCC ACGACGTTCG TCGGCGATGT GGTGACGAAG
CCGCCGCTCA CGCCGTTGAT CGAAGCCGCC CGCGCGCGCG GATGCCCGAC GGTGACGGGC
ACGCAAATGT TCGGCCGCGT GTGCGACCGG ATGGTGGCTT TCCTGCTGGA TGCCGAGCGT
TTTAACTGA
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| Protein sequence | MTQSDASSFS TSLDEGLSGA TRVVFIVGDP IAQVRSPSGV TAALRAAGRD ALVVPAHVAP
ADLPAFFAGV TPMRNVDGVI ITVPHKFSAI KYCGSLTEQA SFLGAVNTLR RTADGNWHGG
MFDGTGFVAA LVDAGCDLRG KHALLVGAGG AGCAIGHALV QGGVASLDVR DNDAERTASL
IGRLNALRQG EVRSAAASVD ASTYDVVINA SPLGMRADDP LPLDVSRLPA TTFVGDVVTK
PPLTPLIEAA RARGCPTVTG TQMFGRVCDR MVAFLLDAER FN
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