Gene Bphyt_6054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6054 
Symbol 
ID6277571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2290572 
End bp2291843 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content61% 
IMG OID642617114 
ProductArsenical pump membrane protein 
Protein accessionYP_001889757 
Protein GI187920725 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.110806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT TGCTGAGTTC CCCTGTGTCC GTCTGGGCTA TCGCCGCGCT CTCAACGCTC 
GGCGTCATCA CCCGGCCGTT CAGGCTTCCT GAAGCAGTGT GGGCGGTGCT TGGCGCACTT
GCCCTATGCG GGCTTGGGAT GCTGTCATGG TCCGACGCAC TTGCGGCGGT CGGCAAGGGC
CTCGACGTCT ACCTGTTTCT GACCGGCATG ATGGTAGCGT CCGAGCTTGC CCGCAAGGAG
GGGCTGTTCG ACTACCTGGC TGCACTTGCT GCGAAACGCG CTGCAGGCTC GGCGAAGAAG
CTGTTCTTTC TGATGTACTG CGTCGGTACT ATCGTGACTG TCTTCATGTC CAACGACGCG
ACCGCAGTCG TGCTGACACC CGCGGTGCTC GCTGTTGCCC ACGTCGTCAA GGCAGAGAAG
CCTCTGCCGT ATCTCTACAT TTGCGCCTTC ATTGCGAACG CCGCGAGTTT CGTCTTGCCC
ATCTCAAACC CTGCGAATCT GGTCATCTTT CAGGACCGTA TGCCGACGCT GCTGAGCTGG
CTCGGTCGTT TCGCCGTACC GTCGGTGTTG AGCATTGTCG CCACCTATCT GGCGCTGCGT
TTCATGCAGC GGCAGGAACT CACGCAGCAG ATTGAATCCG AGGTCGAGGT TCCCAGGCTG
TCGGCGGCAG GCAAAGCGAC GGGCCTCGGC ATCGCCGTGA TGGCTATCGT GATGCTGGGC
GCGTCGGCGC TCGATGTATC CCTTGGCCTG CCGACTTTCT GCGCCGGGCT GGTGCTCTTT
TTGGCCATCT GCATCCTTAA GCGGAAGTTT CTCGGCGCGC ATCTTGGCGA GATTTCCTGG
GCGGTCCTCC CACTGGTCGC CGGACTTTTC GTTCTGGTCG AGGGTCTTCA GCGCACAGGC
GTGATAGCAA ATCTGGCCGC TGTCGTCAGG ACCGCTTCGA CAACTATCCC CACTCACGCG
GGCTGGATTT CCGGTGCCGT CATGGCTGTC GCCTGCAATC TCATCAATAA CCTGCCGGCT
GGCCTGATAG CCGGCTCAGC GCTCACGGCC GCTCATGCAC CCACGCCTGT CGCGAGTGCG
GTCCTGATAG GCGTCGACCT CGGTCCGAAC TTCTCGGTCA CGGGCTCGCT CGCCACCATT
CTCTGGCTGA CGGCCCTGCG CCGGGACGGT ATCGAAGTGA CTGCGTGGTC TTTTCTCAAG
CTGGGTGTCG TCGTGACGCT GCCTGCGTTG GTGACTGCAT TAGGCGCTGT TGCCTTGGGA
GCGACCTGGT AG
 
Protein sequence
MNALLSSPVS VWAIAALSTL GVITRPFRLP EAVWAVLGAL ALCGLGMLSW SDALAAVGKG 
LDVYLFLTGM MVASELARKE GLFDYLAALA AKRAAGSAKK LFFLMYCVGT IVTVFMSNDA
TAVVLTPAVL AVAHVVKAEK PLPYLYICAF IANAASFVLP ISNPANLVIF QDRMPTLLSW
LGRFAVPSVL SIVATYLALR FMQRQELTQQ IESEVEVPRL SAAGKATGLG IAVMAIVMLG
ASALDVSLGL PTFCAGLVLF LAICILKRKF LGAHLGEISW AVLPLVAGLF VLVEGLQRTG
VIANLAAVVR TASTTIPTHA GWISGAVMAV ACNLINNLPA GLIAGSALTA AHAPTPVASA
VLIGVDLGPN FSVTGSLATI LWLTALRRDG IEVTAWSFLK LGVVVTLPAL VTALGAVALG
ATW