Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6054 |
Symbol | |
ID | 6277571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2290572 |
End bp | 2291843 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642617114 |
Product | Arsenical pump membrane protein |
Protein accession | YP_001889757 |
Protein GI | 187920725 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.110806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAT TGCTGAGTTC CCCTGTGTCC GTCTGGGCTA TCGCCGCGCT CTCAACGCTC GGCGTCATCA CCCGGCCGTT CAGGCTTCCT GAAGCAGTGT GGGCGGTGCT TGGCGCACTT GCCCTATGCG GGCTTGGGAT GCTGTCATGG TCCGACGCAC TTGCGGCGGT CGGCAAGGGC CTCGACGTCT ACCTGTTTCT GACCGGCATG ATGGTAGCGT CCGAGCTTGC CCGCAAGGAG GGGCTGTTCG ACTACCTGGC TGCACTTGCT GCGAAACGCG CTGCAGGCTC GGCGAAGAAG CTGTTCTTTC TGATGTACTG CGTCGGTACT ATCGTGACTG TCTTCATGTC CAACGACGCG ACCGCAGTCG TGCTGACACC CGCGGTGCTC GCTGTTGCCC ACGTCGTCAA GGCAGAGAAG CCTCTGCCGT ATCTCTACAT TTGCGCCTTC ATTGCGAACG CCGCGAGTTT CGTCTTGCCC ATCTCAAACC CTGCGAATCT GGTCATCTTT CAGGACCGTA TGCCGACGCT GCTGAGCTGG CTCGGTCGTT TCGCCGTACC GTCGGTGTTG AGCATTGTCG CCACCTATCT GGCGCTGCGT TTCATGCAGC GGCAGGAACT CACGCAGCAG ATTGAATCCG AGGTCGAGGT TCCCAGGCTG TCGGCGGCAG GCAAAGCGAC GGGCCTCGGC ATCGCCGTGA TGGCTATCGT GATGCTGGGC GCGTCGGCGC TCGATGTATC CCTTGGCCTG CCGACTTTCT GCGCCGGGCT GGTGCTCTTT TTGGCCATCT GCATCCTTAA GCGGAAGTTT CTCGGCGCGC ATCTTGGCGA GATTTCCTGG GCGGTCCTCC CACTGGTCGC CGGACTTTTC GTTCTGGTCG AGGGTCTTCA GCGCACAGGC GTGATAGCAA ATCTGGCCGC TGTCGTCAGG ACCGCTTCGA CAACTATCCC CACTCACGCG GGCTGGATTT CCGGTGCCGT CATGGCTGTC GCCTGCAATC TCATCAATAA CCTGCCGGCT GGCCTGATAG CCGGCTCAGC GCTCACGGCC GCTCATGCAC CCACGCCTGT CGCGAGTGCG GTCCTGATAG GCGTCGACCT CGGTCCGAAC TTCTCGGTCA CGGGCTCGCT CGCCACCATT CTCTGGCTGA CGGCCCTGCG CCGGGACGGT ATCGAAGTGA CTGCGTGGTC TTTTCTCAAG CTGGGTGTCG TCGTGACGCT GCCTGCGTTG GTGACTGCAT TAGGCGCTGT TGCCTTGGGA GCGACCTGGT AG
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Protein sequence | MNALLSSPVS VWAIAALSTL GVITRPFRLP EAVWAVLGAL ALCGLGMLSW SDALAAVGKG LDVYLFLTGM MVASELARKE GLFDYLAALA AKRAAGSAKK LFFLMYCVGT IVTVFMSNDA TAVVLTPAVL AVAHVVKAEK PLPYLYICAF IANAASFVLP ISNPANLVIF QDRMPTLLSW LGRFAVPSVL SIVATYLALR FMQRQELTQQ IESEVEVPRL SAAGKATGLG IAVMAIVMLG ASALDVSLGL PTFCAGLVLF LAICILKRKF LGAHLGEISW AVLPLVAGLF VLVEGLQRTG VIANLAAVVR TASTTIPTHA GWISGAVMAV ACNLINNLPA GLIAGSALTA AHAPTPVASA VLIGVDLGPN FSVTGSLATI LWLTALRRDG IEVTAWSFLK LGVVVTLPAL VTALGAVALG ATW
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