Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6053 |
Symbol | |
ID | 6279100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2289351 |
End bp | 2290376 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642617113 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001889756 |
Protein GI | 187920724 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.146292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACA ACACGCCGGT ATTCGACACA GCGCTGACCC GTTTGCTCGG TTGTCGGCAT CCCGTCATTT CAGCCGGCAT GGGCGGCCCG GCGCGCGCCG AGTTGGCGGT CGCCGTCTCT GAAGCCGGCG GCTTTGGCCT GCTCGGCATG GTTGGCGAAG CACCGGAGGT GATCGAGTGC GAGATCGCCG CCGTGCGCGC GACGACGAGC CAACCGTTCG GCGTCAACCT CATTCCTTTC CGGACGGACC CCGCGCTGCT CGATGCGCAA CTCGACGTGT GCCGCGCGGC GCAGGTGCCG GCCATGTGCT TCTTCTGGAA CGTCATGCCG GACGTGGTGA AACGCGCTAA AGACGCCGGC GCGCTCGTCC TCTGGCAAGT CGGCTCGCTC GACGAGGCGC TCGCCGCGCA GCAGGCCGGT GTGGACGCCG TCATCGCGCA AGGTGTGGAA GCCGGCGGCC ATGTGCGCGG GCGCATCGGC ATCATGGCGC TGCTGCCGGA ACTCACGCAG CGTTTGCATG TGCCAGTGGT GGCCTCCGGC GGCTTCGCGA CCGGTGGCGG GCTGATTGCC GCACTCGCGC TCGGCGCGGC GGGCATTCAC TGCGGCACGC TATTCGTCGC GACGCATGAG TCTTTCGCGC ACGACTATCA CAAGCAACGG ATCGTCGATG CCCGCGCGGG CGACACCGTG CATACCGACG TCTACGCGAT CAACTGGCCG CCGGGCTCGC CAGTGCGCGT GCTGGCGAAC AGCGTGACGC GCGAGGCCGG CGACCATCTG TTCGGCAATC ATCCCCACGT GTTGCCGCGC GAAGAAATCG CGCACGACGA CCAAGGGCCG ATCTACAAAT TCAGCACGAT CTCCCCGCTA CGCGATACGG TGGGCGATAT GGAAAAAATG GCGCTGTTCG CGGGGGAATC GTCGGCGCTG GTCGAGCGGT GCGCACCGGC GGCGGAAGTT ATCGCCCGGC TCATGAACGA GGCGGCGGAC GCGGCGGCGC GGGTCCGCGC CGCAAGTGCG CACTGA
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Protein sequence | MQDNTPVFDT ALTRLLGCRH PVISAGMGGP ARAELAVAVS EAGGFGLLGM VGEAPEVIEC EIAAVRATTS QPFGVNLIPF RTDPALLDAQ LDVCRAAQVP AMCFFWNVMP DVVKRAKDAG ALVLWQVGSL DEALAAQQAG VDAVIAQGVE AGGHVRGRIG IMALLPELTQ RLHVPVVASG GFATGGGLIA ALALGAAGIH CGTLFVATHE SFAHDYHKQR IVDARAGDTV HTDVYAINWP PGSPVRVLAN SVTREAGDHL FGNHPHVLPR EEIAHDDQGP IYKFSTISPL RDTVGDMEKM ALFAGESSAL VERCAPAAEV IARLMNEAAD AAARVRAASA H
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