| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6035 |
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| Symbol | |
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| ID | 6280465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2265538 |
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| End bp | 2266857 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617095 |
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| Product | shikimate transporter |
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| Protein accession | YP_001889738 |
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| Protein GI | 187920706 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.503054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CCATCCCGAC GGCCGCCACG GCCGACAGCC GCAAAGCGCG CAGCCAGGCT
CGCCAGGCGG CACTCGGCAG CTTTGTCGGC GCCGTGGTCG ACTGGTACGA CTTCCTGCTG
TACGGCATCG TCGCAGCGCT CGTATTCAAT GCCGAGTTTT TCCCCAAAGT CAGCCCGGCG
ATGGGGACGC TCGCCGCGTT CGCCACCTTC GGCGTCGGCT TTCTGTTCCG CCCGCTCGGC
GGCTTCGTGT TCGGACACTA CGGCGACCGG CTCGGACGCA AGCGCATGCT GGTGCTCACG
GTAATGATGA TGGGTCTGTC GACCGCCGCC ATCGGCCTGC TGCCGTCGTT CGCCAGCATC
GGCTGGTGGG CGCCGGCGCT GCTCGTGAGT CTGCGCGCGA TCCAGGGCTT CGCGGTGGGC
GGCGAATGGG GCGGCGCGGC GTTGATGGCC GTCGAAAGTG CGCCCGAGAA AAAGAAAGCG
TTCTACAGCA GCGGCGTGCA GGTCGGCTAC GGCGTGGGCC TCGTACTTTC GACCGGACTG
ATCGCGCTGA TCAGCCGTTC CATGGACAAC GCCTCGTTCC TGAGTTGGGG CTGGCGCCTG
CCCTTCCTGT TCAGCGTGGT GCTGGTGCTG ATCGCGCTGT GGATCCGCTC GAGCATGGAA
GAGTCGAAGG AATTTGTCGA GAAAGTCGGC AAGCACGGTG AACGCAGCGT TCGCCTGCCG
ATCGTCGAAG CCTTGCTGCG GCATCCGAAG GCGTTTCTGT TGATCATCGC GCTGCGTCTT
GCCGAGTTGT TCACGATGTA TATCGTGACC GCCTTCGCAC TGAACTACTC GACGGCGAAT
CTGCACATGC CGCGCGAGTT CTTCCTCACC ATCGGTTTGC TGGTGGGCGC GCTGAGTTGC
GTGACGATTC CGTGCTTCGC CTTGCTGGCG GATCGTTTCG GCCGCCGCCG CGTGTATATC
GCCGGCGCGC TGGTCGGCAT GCTGAGCGCG GTGCCGTTCT TCCTTGCGCT CGAAGCACGC
TCGACGGTGT GGATCGTGGT GTTCGCCGTC ATGCTCGCCA ACGTTGCGCA CGACATGGTG
GTGAGCGTGC AGCAGCCCAT GTTCACCGAA CTGTTCGGCA CCGAGTATCG CTACAGCGGT
GCGGGCGTGG GCTATCAGGT GGCGAGCGTG GTCGGCGGCG GCTTCACGCC GTTTATCGCG
GTTGCGCTGG TCAGCTTTGC CGGCGGTTCG TGGCATCCGG TGGCGGCTTA TCTGGCGATT
GGCTGCCTGA TCTCGGTGCT CGTGGCGGCG AAAATGAAGA CCGGGCGCAC TGTCGCCTGA
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| Protein sequence | MSTTIPTAAT ADSRKARSQA RQAALGSFVG AVVDWYDFLL YGIVAALVFN AEFFPKVSPA
MGTLAAFATF GVGFLFRPLG GFVFGHYGDR LGRKRMLVLT VMMMGLSTAA IGLLPSFASI
GWWAPALLVS LRAIQGFAVG GEWGGAALMA VESAPEKKKA FYSSGVQVGY GVGLVLSTGL
IALISRSMDN ASFLSWGWRL PFLFSVVLVL IALWIRSSME ESKEFVEKVG KHGERSVRLP
IVEALLRHPK AFLLIIALRL AELFTMYIVT AFALNYSTAN LHMPREFFLT IGLLVGALSC
VTIPCFALLA DRFGRRRVYI AGALVGMLSA VPFFLALEAR STVWIVVFAV MLANVAHDMV
VSVQQPMFTE LFGTEYRYSG AGVGYQVASV VGGGFTPFIA VALVSFAGGS WHPVAAYLAI
GCLISVLVAA KMKTGRTVA
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