| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6026 |
|---|
| Symbol | |
|---|
| ID | 6278818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2256638 |
|---|
| End bp | 2257609 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642617086 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001889729 |
|---|
| Protein GI | 187920697 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.306271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTTT CGTTGCAGCA ACTCAAGGTG TTTGTCGCCG TCGCGCGTGA GCGGAGTTTT
ACGCGCGCGG CGCGCGAGTT CGACTTGACG CAGTCGGCGG TGAGTCGTTG CGTGCGCGAA
CTCGAAGAAG CCGTGGAATT GAAACTGTTC GACCGCACCA CGCGCCAGGT CGAACTGACG
CATGCGGGCG CGAGCCTCGA GCGAAGAATC GGCCGGCTGC TCGATGAAAT CGAACTCACG
CTGCGCGAAG AGCGGGCCGC TTACGACGGC CACACCGGCG TGGTGGTGAT CGCCAGCAAT
CCGGTGTTGT CGTCGAGTTG GGTGGCGCAG GGACTCGCGC GCTGCGCGGC GGCTTTTCCT
GAGCTAACCG TCTGCGTCAG GGATCAGCCG CAAAGCGGCG TGCTCGCGAG CGTCGAACAA
GGCGAGGTGG ACTTTGGCGT GGTCTCGATG GCCGAGCCGC TTGCCGGTGA CCTGTTGCAC
GCGCAACTGG TTTTCACGAC GCCCCTCCAT GCGGTGATGC CACCTGCGCA TCCGCTTGCC
CGCCATGCGA GTGTTGCATG GAACGAGCTG CATGAATGGG CGCTCATCAC GCTGAACGCC
GACACCGGTG TGCGCGCGGC GCTCGAACTC GCCTTCAACG CGAACGGCGT GAAACGACGG
CCGGTGCAGG AACTCGGACA TGTCGCGGCA GTGTTGCGCA TGGTCGAACT CGGGCTCGGC
GTCGGCATAT TGCCCATCGA CGCGCATTGG CCTGCAATAA GCGCGTCACT GGTCAGCCGG
CCGCTCGCGC CGGTGATGAA TCTGGCGACA CTGCTCGTGC ATCGCCGCAA CCGTTCCCTC
CGACCCAACG CCGCAGCAGG GTGGGCACAG TTCTCCGCCA CTTCACAGAC CGCCGACGTG
TCGCCGTCCG CTTCGCAGTT GCAGACGAAG CCGACCGTTG CGCGCGACGG CGTGGTTCTC
CACGAGCCCT AG
|
|---|
| Protein sequence | MNVSLQQLKV FVAVARERSF TRAAREFDLT QSAVSRCVRE LEEAVELKLF DRTTRQVELT
HAGASLERRI GRLLDEIELT LREERAAYDG HTGVVVIASN PVLSSSWVAQ GLARCAAAFP
ELTVCVRDQP QSGVLASVEQ GEVDFGVVSM AEPLAGDLLH AQLVFTTPLH AVMPPAHPLA
RHASVAWNEL HEWALITLNA DTGVRAALEL AFNANGVKRR PVQELGHVAA VLRMVELGLG
VGILPIDAHW PAISASLVSR PLAPVMNLAT LLVHRRNRSL RPNAAAGWAQ FSATSQTADV
SPSASQLQTK PTVARDGVVL HEP
|
|---|
| |