| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6022 |
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| Symbol | |
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| ID | 6279538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2250826 |
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| End bp | 2251980 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617082 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001889725 |
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| Protein GI | 187920693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.113173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.244063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG TGAGTTTGTT GGCGAGTGCG TGCGCTGTGG CGCCGGGGAT GCGGATGGAG
ACGTCTCACG TGCAGAATAT GACGGGTGCG TCCAATGCTT CGAGCGTTGC TGGAGAAGCC
GGCGAAGGCA TGGCCGGCGA ACGGGCAAGT GCAACGAATG GCACGCCGGA CATCGCGATA
ACAGAGGTCG ACGCGGCGCT GCTTTCGCAG TTGGCACAAC GTGGAAAACA GCAGCAGAAC
GAGCTGTCTC AATTGCTCTC CGGAGTGCCG CGGCCCTACG CGGTCGGGCC CGGTGATGTG
CTGCAGATCG TCGTTTGGGA TCATCCGGAA TTCGCTGCCG CACTCGGCTC TTCGCAGACA
CAATCGTCCA CGAAGCCGGG AGACCCGCTG TCTGGATTCG TGGTTGACCA GAACGGTGGG
TTGACGTTTC CGTATGCGGG CACGCTACAC GTGGCGGGCC TGCGTATCGA AGAGATTCAG
CAACGGCTGA GCAGCGCGCT CGCAACATAT TTCGTCAAGC CGCAAGTCAC CGTCCGAATG
GCATCCTATC GCGCGCATCA GGTCTACGTC GACGGCGAAG TGCGTAGTCC TGGTGCATTG
GCGGTCAACG ACGTGCCCAT GACCCTTTAC GAAGCAGTTA GCCGCGCGGG TGGTTTCAGT
GAAACGGCCG ACCAGAGCGA TCTCGTTCTG GTGCGTGGCG ATCACTCTTA TCGCGTGAAT
CTGACGCAAA TGCTCGCTCA GGGATTAAGC CCGTCGCGGC TCTATCTGAA CCCCGGTGAT
CTGCTGCGTG TGGGCTCGCG TGATGAAAAC GATGCATATG TGATGGGCGA AGTGAACAAA
CCGGTTTCGG CTATTCCGCG CCGAACGGGC CGCATGACAT TGGCCGACGC ACTTTCGCAG
GCCGGCAGCG TGAATGCCTC GACTGCCGAC GCCGCTCAGA TGTTCGTGAT CCGCGGTTCA
CTTCCCGGGA CGCCGCAGGT GTTTCACCTC GATGGTCATT CACCGGTCGC GATGCTGCTT
GCGAAGGATT TCGAATTGCA GCCGAAGGAC GTGGTGTACG TGGATGGTAG CGGTCTGGTT
CGCTTTAATC GCGTGCTGAG TTTGTTGATG CCGTTGATTA ACACTGGTCT GACGGCGGGA
GTCATTGCGA AATGA
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| Protein sequence | MTAVSLLASA CAVAPGMRME TSHVQNMTGA SNASSVAGEA GEGMAGERAS ATNGTPDIAI
TEVDAALLSQ LAQRGKQQQN ELSQLLSGVP RPYAVGPGDV LQIVVWDHPE FAAALGSSQT
QSSTKPGDPL SGFVVDQNGG LTFPYAGTLH VAGLRIEEIQ QRLSSALATY FVKPQVTVRM
ASYRAHQVYV DGEVRSPGAL AVNDVPMTLY EAVSRAGGFS ETADQSDLVL VRGDHSYRVN
LTQMLAQGLS PSRLYLNPGD LLRVGSRDEN DAYVMGEVNK PVSAIPRRTG RMTLADALSQ
AGSVNASTAD AAQMFVIRGS LPGTPQVFHL DGHSPVAMLL AKDFELQPKD VVYVDGSGLV
RFNRVLSLLM PLINTGLTAG VIAK
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