Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6009 |
Symbol | |
ID | 6279574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2237876 |
End bp | 2238595 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642617069 |
Product | protein of unknown function UPF0029 |
Protein accession | YP_001889712 |
Protein GI | 187920680 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.69631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCCG CAACCCAGGC GCACAGGCCG TGCGGGCGTG TATCGGAGAG ACTGCGTCAG CGGCCGCCGA TCCGTTACCA TGGCGGGCAC GACGCCGCGT GCGGTGCGTA CTTTTTATCT ACCGAACTCC TTGCCTTGCC CACTTACACC CTGCCCGCGC CGTTGAGCGC GGAACTCGAG ATACGGAAGA GCCGATTTAT TGCGTACGCG ATACCGGTTG CCGACCGCGA CGCCGCGATG GCCGAGTTGC GGCGCCTGCG CGACGAGCAT CCTGCCGCGA CGCATGTCTG TTGGGCGCTG CTGGCCGGCG GCCAGTCCGG CATGTCCGAC GACGGCGAGC CTTCCGGCAC CGCCGGCCGG CCGATTCTCG AAGTGCTGCG GCATCACGAT CTGGACGGCG TGCTGGCCGC CGTCGTGCGC TACTACGGCG GCGTGAAGCT CGGCGCCGGC GGCCTCGTGC GCGCGTACAC CGATGCGATC GCTTCGGCGC TGCTGGATGC GCCGCGCGTC GAGCGGATCG CGCAGGTTTC GCTGACCGTC GAGGTCAGTT ACGCCGACGA GGCGAAAGTG CGCCGATGGA TCGATGCCGA AGGCTATGCG CTCGTGGACA GCGCCTACGC GATGCTGGTG AAGATGACGA TCCGCTTGCC CATCAACGCG CTGGACGATG CGCAGCGGGC GTTGGTGGAT ATGACTCAGG GAAAAGCCGG CTTCTCCTGA
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Protein sequence | MHAATQAHRP CGRVSERLRQ RPPIRYHGGH DAACGAYFLS TELLALPTYT LPAPLSAELE IRKSRFIAYA IPVADRDAAM AELRRLRDEH PAATHVCWAL LAGGQSGMSD DGEPSGTAGR PILEVLRHHD LDGVLAAVVR YYGGVKLGAG GLVRAYTDAI ASALLDAPRV ERIAQVSLTV EVSYADEAKV RRWIDAEGYA LVDSAYAMLV KMTIRLPINA LDDAQRALVD MTQGKAGFS
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