Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6008 |
Symbol | |
ID | 6279763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2237089 |
End bp | 2237715 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617068 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_001889711 |
Protein GI | 187920679 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.435355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACC TATCCACGTT AGGGACTTTC GTTGCGGTTG TTCTCGGGCT CTTTCTGATT CCGGGTCCGG CTGTGCTGCT GGTGTTGACG CGCACCGTGC ATGGCGGCCG TAAGGCAGGC ATTCTCACTG GCCTCGGCAT TGCGGTTGGC GATTTCATTC ATACGCTGGG CGCGTCGGTC GGTCTCTCGG CGCTGCTGAT GACTTCGGCG CTGGCCTTCA ACGCGGTCAA GTTCGTCGGC GCCGCCTACC TGGTTTATCT GGGCGTTCGC GCGTTGCGCG AGAAACAGGC CGGCGCGCAC ATGCCGGCCG TCGCGCCGGT GTCCGCCTCG AAAGCATTCT TTCAGGCCAT TCCCGCCGAA GTATTGAATC CCAAGACCGC GCTGTTTTTT CTCGCGTTTC TGCCGCAGTT CGTGCGCCCC GAACACGGTT CCACGTTTCT GCAGTTCACC ACGCTCGGGC TGATTTTTGT CGGCATGAGC GCGCTCTATA CGACGCTGAT CGTGTTGACG ATTCGTCCGC TGGGCAAATT CGTCAAGCGT CTGACGTGGC TGACGCGCTG GCAGAACAAG ATCATCGGCG TGCTGTTCAT TTCGCTTGGT CTGCGCGTGG CCACGCAAAC GCGTTGA
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Protein sequence | MLDLSTLGTF VAVVLGLFLI PGPAVLLVLT RTVHGGRKAG ILTGLGIAVG DFIHTLGASV GLSALLMTSA LAFNAVKFVG AAYLVYLGVR ALREKQAGAH MPAVAPVSAS KAFFQAIPAE VLNPKTALFF LAFLPQFVRP EHGSTFLQFT TLGLIFVGMS ALYTTLIVLT IRPLGKFVKR LTWLTRWQNK IIGVLFISLG LRVATQTR
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