Gene Bphyt_5984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5984 
Symbol 
ID6279980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2211408 
End bp2212091 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID642617045 
Producthypothetical protein 
Protein accessionYP_001889688 
Protein GI187920656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.834885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.450186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCTG CCCTTTCCGA GCAACGGGAG CCCGAACTTC CGCTGCATAC GCCCAGTGTA 
TCGTCGGTGA CACTCGCCGC GATCATCGCG GTCATTGCGT GGATTTCGAT CGTCGCGCAA
GCCGAGGTGA CGATCGATCG CACGCTCGCC CGCGGGCTCA GCGTGCTCGA CGGCCTCGCC
CGCATGAGCA GTTACCTCAC CAATCTCACG GCGCTCGCCT GCGCGATCTG TTTCACCTGC
GTGGCCTTGC GCAGACACAG ATCGACGCCC GCGCGCTTTT TCCGGCAGCC TACCGTCGTG
ACCGCCGTGG TGGTGTACAT GGCGTTCGTG GGGATCGCCT ATAACCTGCT GTTGCGAGGT
TACTGGACGC CCACGGCGTT CCGGATGCTG CTCAACGAAT CGCTCCACAG TGTCTTGCCC
ATGCTCTCCG CGCTCTACTG GGTGCTGTTT GTGCCGCGCT TTCATCTCAA GCTGCGGCAT
TGTCTGTGGT GGCTGGTGTA TCCGCTGACC TACCTTGGCG TGACGTTCTG GCGCGGGCGT
TTGTCGGATT TCTATCCCTA TCCGTTCATC AATGTCGAAA GGCTCGGCTT CACGCACGCC
ATGGTGAATT CCGCGCTGCT GTTCGGCGGC TTCCTTATGT TGATGGCCCT ATTCGTGGGG
ATCAATTCCC GGCGGCGGCA CTGA
 
Protein sequence
MRPALSEQRE PELPLHTPSV SSVTLAAIIA VIAWISIVAQ AEVTIDRTLA RGLSVLDGLA 
RMSSYLTNLT ALACAICFTC VALRRHRSTP ARFFRQPTVV TAVVVYMAFV GIAYNLLLRG
YWTPTAFRML LNESLHSVLP MLSALYWVLF VPRFHLKLRH CLWWLVYPLT YLGVTFWRGR
LSDFYPYPFI NVERLGFTHA MVNSALLFGG FLMLMALFVG INSRRRH