Gene Bphyt_5983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5983 
Symbol 
ID6277984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2210332 
End bp2211321 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID642617044 
ProductOmpA/MotB domain protein 
Protein accessionYP_001889687 
Protein GI187920655 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.180638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.475953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA GAAGATCGCG CGCCTCGCGG GAGGAGCAGG CACCCGCGCC GGTGATCGTG 
CGCCGGTCGA GAAAAGGCGG CGACCACGGC GCCCATCACG GCGGCGCATG GAAGATCGCC
TACGCCGATT TCGTCACCGC GATGATGGCG TTCTTCCTGC TGATGTGGCT GCTCGGCTCC
ACGTCGAAGT TCGACAAGCA GGGTATCGAA GATTATTTCA ACACGCCGCT GTCGAGCCTG
CTCGGCGGCA ACGAAGGCAC GACCGCCGCG CGTCCGAGCG TGGTGCAAGG CGGCGGACGC
GACATCTCCG ATACGCGGCC CGCGGTCGGC AAGAAAAGCC AGAGCGAACC GACACCGCCC
GCCGTGACCA CACCGTCGGT GGCGCCGTCC GATGCCACGC GTCTCGAACA ACTGAAGGCG
AAGCTCACCG CCTTGATCGA GCAAAGCCCC ATATTGAAGG CGTTCAAGGA TCAGATCCGC
ATCTCGATCA CGAACGAAGG GCTGCGTATC GAGATCGTCG ATTCGCAAAA CCGGCCGATG
TTCCCTTCCG GCAGTTCGAA GCTTCAGCCG TATGCGGTGA CGATCCTCAC GCAGATCGGC
GCGGCCCTGA ACGATGTCGA CAACCGCGTT TCGATTGCCG GCCATACGGA TGCCGTGCCG
TACACCGCGG GCCCGGAAGG TTATTCGAAC TGGGAACTGT CGTCGGAACG CGCGAACGCC
GCGCGCCGCT CGCTGGTCGC GGGCGGCATG CATGGCGAAA AACTGCTACA GGTGCGTGGA
CTGGCCGACG TATTGCCGCT GAACAGCCAA GTCGCCGACG AGCCGACCAA TCGGCGCATC
AGCATTCTCG TATTGAACAA GGCCGCGGAA CTCGCCTTCT TTCACGATGG CGGACGCACT
GCGATCGACG AAGCCACGCC GGCAAGTTCG GCCATTCCCA CCGTGATCGG GCGCTTGCAG
CCGGTGACCG GTTCGCATAG CACGCCGTAG
 
Protein sequence
MSERRSRASR EEQAPAPVIV RRSRKGGDHG AHHGGAWKIA YADFVTAMMA FFLLMWLLGS 
TSKFDKQGIE DYFNTPLSSL LGGNEGTTAA RPSVVQGGGR DISDTRPAVG KKSQSEPTPP
AVTTPSVAPS DATRLEQLKA KLTALIEQSP ILKAFKDQIR ISITNEGLRI EIVDSQNRPM
FPSGSSKLQP YAVTILTQIG AALNDVDNRV SIAGHTDAVP YTAGPEGYSN WELSSERANA
ARRSLVAGGM HGEKLLQVRG LADVLPLNSQ VADEPTNRRI SILVLNKAAE LAFFHDGGRT
AIDEATPASS AIPTVIGRLQ PVTGSHSTP