| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5978 |
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| Symbol | |
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| ID | 6277614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2204587 |
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| End bp | 2205351 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617039 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889682 |
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| Protein GI | 187920650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.161271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.813705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGATA CGGGAATCAA GAAGGTGGCG CTGGTAACGG GCGCGGGTAG CGGGATCGGC
CGCGCGTGTG CGCTCAAGCT GCTGGAACAC GGTTATAGCG TCGTGCTGGC CGGCCGTCGT
CAGGCGCCGC TCGACGACGT CGTTCGAGAA GCGCAGCAAC TCGGCGGCGA CGCGCTCGCG
GTGGCGTGCG ACGTCACGAA CGCCGATAGC GTCAGCGCGT TGTTCGAGAC GATCCGCGCG
CGCCGCGGCC GGCTCGACGT GCTGTTCAAC AACGCGGGCC GCAACGGTTC GCCCGTCGAT
ATCGACGAAC TCGATATCGA CGAATGGCGC TCGGTGGTCG ACACCAATCT CACTGGCGTC
TTTCTATGCA CGCGCGCGGC CTTCGGTCTG ATGAAAACGC AGAATCCGCG CGGCGGGCGC
ATCATCAATA ACGGTTCCAT CTCGGCGCAT GCGCCGCGGC CGAACAGCAT TGCCTATACC
GCCACCAAGC ACGCTATCAC CGGACTCACG AAAGCCGTGT CGCTGGATGG TCGCAAATAC
GACATCGTGT GCGGGCAGAT CGACATCGGC AATGCCGCGA CGGAAATGGC CGAACGCATG
GCGCGCGGCG TACCGCAGGC GAACGGCGAG ATCGCGGTCG AGCCGCTGAT GGACGTTCAG
CACGTGGCGG ACGCCGTGCT GCACATGGCC GAACTGCCGC TGTCGGTGAA CGTGCAGTTC
ATGACGATCA TGGCGAGCAA GATGCCGTTC GTCGGCCGGG GCTGA
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| Protein sequence | MTDTGIKKVA LVTGAGSGIG RACALKLLEH GYSVVLAGRR QAPLDDVVRE AQQLGGDALA
VACDVTNADS VSALFETIRA RRGRLDVLFN NAGRNGSPVD IDELDIDEWR SVVDTNLTGV
FLCTRAAFGL MKTQNPRGGR IINNGSISAH APRPNSIAYT ATKHAITGLT KAVSLDGRKY
DIVCGQIDIG NAATEMAERM ARGVPQANGE IAVEPLMDVQ HVADAVLHMA ELPLSVNVQF
MTIMASKMPF VGRG
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