Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5969 |
Symbol | |
ID | 6279652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2197778 |
End bp | 2198563 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642617031 |
Product | Peptidase M23 |
Protein accession | YP_001889674 |
Protein GI | 187920642 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.601994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAC CATGGCAATT GACGGGGACC CGGTTGCTGG CAGTGGCCGC GCTCAGCGTG ATATTCGGCG GTTGTACGAG CATGCCGTGG GAGAGCACGC CGTTTTACAG CAGCACACCT TCCCGACCGA CCACGCTCAG CACGGTGCCG GTTCCCGCCG GTTTTTACCG GGTCAATCCG GGCGATACGA TCGGCGGGAT TGCATCGGCA TATGGCCGCA AGCCGCAGGA GATCGCCGCG TGGAACGGAC TTGCGGCCAA CGCCGCCGTC ACGCCGGGAC AAGTGCTGCG AGTCTCTCCG CCGATGGCCT CGGGCAGCGT CGTGACGCCG CCGGTCGCCG TCGGGCCGAA CGGTTCCGCC ACGCCCGGGG TGCCCGGCGT GCCCGGCGCG CCCACGGCAG CGGCCGGACC GCAGCAGGGC GTATTGCAAT GGCCGCTGCG TGGGCCGGTG CTGAAAGCCT TCGCGCCGGG TAGATCGAAC GGCATCGTGA TCGGCGGCCG GGCGGGCGAT CCGGTCAAGG CGGCCGCCAC CGGCCGCGTG GTGTACGCCG GTACGGGTAT CGAGGCGTAC GGCCCGCTCA TCATCATCAA GCACGACGAC TCGCTGATCA CCGCCTACGG GCAGAACAGC ACGCTGCTCG TCAAGGAAGG CGACGCGGTC GCGCAGGGGC AAACCATCGG CGAAGTCGGA GTGGATAGCC GCGGGGTAGC GTCGATCCAG TTCGAGGTCC GCCAGAACGG TCAGCCGGTC GATCCGCTCG CGTGGCTGCC CAAGTCGGGT GGGTGA
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Protein sequence | MTRPWQLTGT RLLAVAALSV IFGGCTSMPW ESTPFYSSTP SRPTTLSTVP VPAGFYRVNP GDTIGGIASA YGRKPQEIAA WNGLAANAAV TPGQVLRVSP PMASGSVVTP PVAVGPNGSA TPGVPGVPGA PTAAAGPQQG VLQWPLRGPV LKAFAPGRSN GIVIGGRAGD PVKAAATGRV VYAGTGIEAY GPLIIIKHDD SLITAYGQNS TLLVKEGDAV AQGQTIGEVG VDSRGVASIQ FEVRQNGQPV DPLAWLPKSG G
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