| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5966 |
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| Symbol | |
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| ID | 6279509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2191925 |
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| End bp | 2194378 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642617028 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001889671 |
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| Protein GI | 187920639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.684528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCG TCGATCTGGA ATTCGACCAG CTCAACAGTA CCGTCGACGC GCTACGGCGC
TCAATTTCCA ATCGCATGAT GTACGGTGTC GGCAAGGACG CCGTCACCGC GCATCCGCAT
GACTGGCTGC ACGCCGCGGC GCTCGCCGTG CGCGACCGGC TGGTCGCGCG CTGGATGAAG
ACCACGCGCC TGCAATACGA ACAGGACGTG AAACGCGTCT ACTACCTGTC GATGGAGTTC
CTGATCGGCC GGACCTTTAC GAACGCCTTG CTCGCGCTGG GCATCCACGA TCAGATGAAG
GAAGCGCTGG CGAGCCTGGG CGTGGATATG GATGCGCTGA CCGATATCGA GCCGGACGCC
GCGCTCGGCA ACGGCGGCCT CGGCCGGCTC GCGGCCTGCT TTCTCGATTC GATGGCGACG
CTCGGCATTC CGGGCTTCGG CTACGGCATC CGCTATGAAT ACGGCATGTT CCGTCAGCAG
ATCGTCAATG GCGAGCAGGT CGAAGCGCCG GACTACTGGC TGCGCGCGGG CAATCCATGG
GAGTTTCCGC GGCCCGAAGT CACTTACATG GTTCACTTCG GCGGCCGCAC GGTGCAGCGC
GGCGAACATG TGGAATGGAT CGACACTCAG CACGTGAACG CCACCGCGTA CGACACCGTC
ATTCCGGGTT ACGCGACCGA CGCGACCAAC ACGCTGCGCC TATGGTCGGC GCGTGCCGCC
GAGGAGCTCG ACCTCGGCGC GTTCAATCGT GGTGACTACC GCAATGCGGT CGACACCAAG
AACATGTCGG AGAACGTCTC ACGTCTGCTG TATCCGGACG ACTCGACGCC GGCCGGCCGC
GAACTGCGCT TGCGCCAGGA GTACTTTTTC GTCTCGGCGA CCATGCAGGA TCTGATTCGC
CGCTATCAGC GCACGCACAG CACGTTCGGG CGCTTCTCCG AAAAAGTGGC GGTGCATCTG
AACGATACGC ACCCCGTGCT GGCGATTCCC GAACTGATGC GTTTGCTGGT GGACGTCCAC
CATCTGCAGT GGGACAAGGC GTGGAAGCAT GTGACGCAGA TCTTCTCGTA CACGAACCAC
ACGCTGATGC CCGAGGCGCT CGAAACGTGG GACGTCGAGT TGCTTGCGCG GCTGTTGCCG
CGCCATCTCG AGATCATCTT CGAGATCAAT GCGCAGTTTC TCAAGCACGT GAGCGAGCAA
TCAGGGCACG ACGCCGAGAT GATCCGCCGC ATTTCGCTCG TCGACGAATA CGGGCAGCGG
CGCGTGCGGA TGGCGTATCT GGCGATCGTT GCGAGCCACA AGGTGAACGG CGTGTCGAAG
CTGCACTCGC AGTTGATGAC ACGCGATATC TTCGCGGACT TCGCGCGCGT CTTTCCGGAC
CGCTTCACCA ATGTCACCAA TGGCATTACC CCGCGCCGCT GGCTCGCGCA GGCAAGCCCG
TCGCTGTCCT CGCTGATCGA TCAGCAGATT GGCAAACATT GGCGCAGCAA TCTGTTCGAA
CTGGAACAGC TGCGCAACCT GCGCACGGAC AGCGGCTTTA TCGAGGCCTT CCGTGAAGCA
AAGCGGCAGA ACAAACTGCG GCTCGTGCAC CGTCTCGCGC ATCACACCAA ACTGCATTTC
GATCCGGACG CGCTGTTCGA TCTGCAGGTC AAGCGCATTC ACGAATACAA GCGGCAACTG
CTCAACGTGC TGCATGTGAT CGTGCGCTAC AACCAGATTC GCGCAAATCC CGAACGCGAC
TGGGTGCCGC GCGTGGTGAT GTTCGCCGGC AAGGCCGCGT CCGCGTATCG GATGGCGAAG
ACCATCATCA AACTGATCGG CGACGTGAGC GAGAAGGTCA ATCACGATCC GCTGGTGGGC
GACCGTCTGA AAGTGGTGTT CGTGCCGAAC TACGGCGTGA GCGTGGCGGA GTTGATCATT
CCGGCCGCGG ATCTGTCGGA GCAGATTTCG ATGGCCGGCA CGGAAGCATC GGGCACCGGC
AACATGAAAC TCGCGCTCAA CGGCGCGTTG ACGATCGGCA CGATGGACGG CGCGAATATC
GAAATCTGCG ACGCGGTGGG CCGCGAGAAC ATCTTCATCT TCGGCCATAC CGCCGACGAA
GTGGACAACC TGCGCGCCAC CGGCTACCGG CCGCGGCAAA TCTACGAAGA GAATGCGGAA
CTGCGCACGG CGCTCGACCA GATTCGCACG GGCTTCTTCT CGCCGGACGA TCCGCTGCGC
TTCTCGGATA TTTTCCACAC GCTGGTCGAC TGGGGCGATC ACTACATGGT GCTCGCCGAT
TTCGCCGCGT TCGCCAAGGC GCAAGACGAA GTGGACGCGC GCTTCGTCGA CAAGCGTGCA
TGGACGGAAA GCGCGATCGA GAATGTGGCG GGCATGGGGC AGTTTTCGTC GGATCGCACG
ATCGGCGAAT ATGCACGCAA CATCTGGCAT GTGAATCCGC TGAATATCGA ATAG
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| Protein sequence | MTAVDLEFDQ LNSTVDALRR SISNRMMYGV GKDAVTAHPH DWLHAAALAV RDRLVARWMK
TTRLQYEQDV KRVYYLSMEF LIGRTFTNAL LALGIHDQMK EALASLGVDM DALTDIEPDA
ALGNGGLGRL AACFLDSMAT LGIPGFGYGI RYEYGMFRQQ IVNGEQVEAP DYWLRAGNPW
EFPRPEVTYM VHFGGRTVQR GEHVEWIDTQ HVNATAYDTV IPGYATDATN TLRLWSARAA
EELDLGAFNR GDYRNAVDTK NMSENVSRLL YPDDSTPAGR ELRLRQEYFF VSATMQDLIR
RYQRTHSTFG RFSEKVAVHL NDTHPVLAIP ELMRLLVDVH HLQWDKAWKH VTQIFSYTNH
TLMPEALETW DVELLARLLP RHLEIIFEIN AQFLKHVSEQ SGHDAEMIRR ISLVDEYGQR
RVRMAYLAIV ASHKVNGVSK LHSQLMTRDI FADFARVFPD RFTNVTNGIT PRRWLAQASP
SLSSLIDQQI GKHWRSNLFE LEQLRNLRTD SGFIEAFREA KRQNKLRLVH RLAHHTKLHF
DPDALFDLQV KRIHEYKRQL LNVLHVIVRY NQIRANPERD WVPRVVMFAG KAASAYRMAK
TIIKLIGDVS EKVNHDPLVG DRLKVVFVPN YGVSVAELII PAADLSEQIS MAGTEASGTG
NMKLALNGAL TIGTMDGANI EICDAVGREN IFIFGHTADE VDNLRATGYR PRQIYEENAE
LRTALDQIRT GFFSPDDPLR FSDIFHTLVD WGDHYMVLAD FAAFAKAQDE VDARFVDKRA
WTESAIENVA GMGQFSSDRT IGEYARNIWH VNPLNIE
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