Gene Bphyt_5943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5943 
Symbol 
ID6277653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2165335 
End bp2166267 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content63% 
IMG OID642617006 
Productphosphonate metabolism PhnJ 
Protein accessionYP_001889649 
Protein GI187920617 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3627] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC CCGAAACATC TTTCGCAACC GCGCCCACGG CGTCATACGA CAGCGCCGCC 
GACGGCTACA ACTTCGCGTA CCTCGACGAA CAGACCAAAC GCATGCTGCG CCGCGCCTTG
CTCAAGGCCG TGGCCGTGCC GGGTTATCAG GTGCCGTTCG CCTCGCGTGA AATGCCGCTG
CCGTTCGGCT GGGGCACCGG CGGCATTCAG GTCACCGCGG CGATCATCGG CAAACAGGAC
ACGCTGAAGG TGATCGATCA GGGCTCCGAC GAAACCACCA ACGCGGTCAA CATCCGCCGC
TTCTTCGCGC GCACGACCGG CGTGCCGACC ACGCGCCGCA CCGTCGACGC GACGATCATC
CAGACGCGTC ACCGCATTCC CGAAGCGCCG CTCACCGAGA AGCAAATCCT CGTCTATCAG
GTGCCGATGC CCGAGCCGCT GTTTCGCCTC GAACCGCGTG TCGCCGAATG CAAGAAGCTG
CATGCGCTCG CCGATTACGG CCTGATCAGC GTAAAGCTCT ACGAGGATAT CGTGCATCAC
GGCAGCATCG CGACCACGTA CGACTACCCG GTGATCGTCA ACCATCGCTA CCTTGCCTCG
CCCTCGCCGA TTCCGAAGTT CGACAATCCG AAGATGCATA TGAACCCCGC GCTGCAATTG
TTCGGCGCCG GCCGCGAACG GCGCATTCAT GCAATTCCGC CGTACACGCC GGTGCGCAGC
CTCGACTTCG ACGATCATCC CTTCGAGGTG CAGAAGTGGC AACACGCCTG CGCGCTGTGC
GGATCGACGG AAAGCTTTCT CGACGAAATG ATCGTCGACG ACGCCGGCAA ACGCATGTTC
GTTTGCTCCG ATAGCGACTA CTGTCACGAA CGCCGCGGCG ACGTCGATCT CGACCTGCCG
TCGCGCGAAG CACGCAAGGG AGAGCCCGCA TGA
 
Protein sequence
MNAPETSFAT APTASYDSAA DGYNFAYLDE QTKRMLRRAL LKAVAVPGYQ VPFASREMPL 
PFGWGTGGIQ VTAAIIGKQD TLKVIDQGSD ETTNAVNIRR FFARTTGVPT TRRTVDATII
QTRHRIPEAP LTEKQILVYQ VPMPEPLFRL EPRVAECKKL HALADYGLIS VKLYEDIVHH
GSIATTYDYP VIVNHRYLAS PSPIPKFDNP KMHMNPALQL FGAGRERRIH AIPPYTPVRS
LDFDDHPFEV QKWQHACALC GSTESFLDEM IVDDAGKRMF VCSDSDYCHE RRGDVDLDLP
SREARKGEPA