| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5942 |
|---|
| Symbol | |
|---|
| ID | 6277883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2164193 |
|---|
| End bp | 2165338 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642617005 |
|---|
| Product | phosphonate metabolism |
|---|
| Protein accession | YP_001889648 |
|---|
| Protein GI | 187920616 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3626] Uncharacterized enzyme of phosphonate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTTG CCGTCAAGGG TGGAGAACGC GCGATCGAAG CGTCGTGGCG TCTGCTCGAC
AAGGCACGCC GCGGCGACAC GCGGCTGGCC GAACTCAGCG TCGCGCAGAT TCGCGAACAA
CTGCGCCTCG CGGTGGCGCG CGTGATGACC GAAGGCTCGG TCTACGATGA AGAACTCGCC
GCGCTGGCCA TCAAGCAGGC TGCCGGCGAT CTGGTCGAAG CGATCTTTCT GCTGCGCGCG
TATCGCACCA CGTTGCCGCG CTTCGGCTAC ACGCAGCCGA TCGATACCGA AGCGATGCAA
ACAGAGCGTC GCATTTCGGC GACCTTCAAA GACGTGCCCG GCGGGCAGTT GCTGGGCGCA
ACTTACGATT ACACGCAGCG TCTGCTGGAT TTTGCGTTGC TGGCCGAAGG CGATGCGGCT
GCTAGCGTAG CGCCGCCGCC TTCGAGTCAA GCCGCCGCAG TGGAAACAGA AACGATGCCG
CGCGTCGTGA GCCTGCTCGA CAAGGAAGGG TTGATCGAAC AGGAACGCCC CACGCCGAAT
GCAGCGGAAC CCGGCGACCT CACGCGCGAG CCGCTCGCCT TTCCGGCGAG CCGCGCCACG
CGCCTGCAAA ATCTCGCGCG CGGCGACGAA GGCTTTCTGC TTGCGATGGG TTACGCGACA
CAGCGCGGCT ACGCGAATTC GCATCCGTTC GCGGGCGAGA TCCGCTTCGG CACGATCGCC
GTGGAAATGG AACTCGACGA ACTCGGCGAA ACGGTCGAAA TCGGCGACAT CGACATCACC
GAATGCCAGA TGATCAACCA GTTTGCCGGC AGCGGCGAGG TGCCGCCCAC GTTCACACAA
GGCTACGGTC TCGCGTTCGG CCACTCAGAG CGTAAGGCCA TGGCGATGGC GCTCGTCGAC
CGCGCGCTGC GCGCCGAAGA ACTCGGCGAA ACGCTTGCCT CGCCGACGCA GGATATCGAA
TTCATGCTCT CGCATAGCGA TAACGTCGAG GCGTCCGGTT TCGTGCAGCA TCTGAAGCTG
CCGCATTATG TCGACTTTCA ATCGGAGCTG GAACTCGTGC GCCGTTTGCG CGCGAAGCAT
TATTCCATGC AGAGCCAGGA AGAAGGCACG GATCAACCCA GCGGTCAGCA GGAGCAGGCA
GCATGA
|
|---|
| Protein sequence | MYVAVKGGER AIEASWRLLD KARRGDTRLA ELSVAQIREQ LRLAVARVMT EGSVYDEELA
ALAIKQAAGD LVEAIFLLRA YRTTLPRFGY TQPIDTEAMQ TERRISATFK DVPGGQLLGA
TYDYTQRLLD FALLAEGDAA ASVAPPPSSQ AAAVETETMP RVVSLLDKEG LIEQERPTPN
AAEPGDLTRE PLAFPASRAT RLQNLARGDE GFLLAMGYAT QRGYANSHPF AGEIRFGTIA
VEMELDELGE TVEIGDIDIT ECQMINQFAG SGEVPPTFTQ GYGLAFGHSE RKAMAMALVD
RALRAEELGE TLASPTQDIE FMLSHSDNVE ASGFVQHLKL PHYVDFQSEL ELVRRLRAKH
YSMQSQEEGT DQPSGQQEQA A
|
|---|
| |