| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5939 |
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| Symbol | |
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| ID | 6280014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2162132 |
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| End bp | 2162890 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617002 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_001889645 |
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| Protein GI | 187920613 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA ACGACAACGC GACGCCGGGC ACGATGCTCG AACGCGGCGC GGGCGTTGCC
GTGTGGCGGC AGATCGAGCA GATCCTGGCG GCGGAAATCG CCGCCAGCGG TTTCGGCGAA
GAAGGGCGCC TGCCGAGCGA GGGCGAGCTG GCCAAACGCT TCGACGTGAA CCGGCATACC
GTGCGCCGTG CCATGCTGGG TCTCGCGGCG TTGGGCCTCG TCAGCGTCGA GCAGGGGCGC
GGCACCTTCG TGCAACCCGG CGCCATCGAC TATACGATTG GCCGCCGCAC GCGGTTTACG
GAAAACTTGC GCCAGCAGCA TCACGCGGCG GCGGGCACGA TGTTGTCGGC CGCGCGCGTG
AAGGCCGAGC CGAGCGTCGC GAAGGCGTTG AGTCTGCGGG CCGGCGCATC GGTGTATCGG
ATCGAATCGC TCCACGAGTC CGACGGCGTG CCGCTCACGT TCGCGCGCAA CTGGTATCCG
GCGGCGCGTT TCGTGGACCT GCCGGAAGTG CTGGAGCGCA CCGGCGGCAT CACCAAGGCC
ATGGCGGAAT TCGGTGTCAA CGACTATCTG CGCAAGTGGA GCCGTATCGG CAGCGTGCTG
CCCGAGCCGG AGGTGGCGCG GCGTTTGAAT ATCAATCGTC AGCAACCGGT GCTGTGGGTC
GAAAACGTCG ATGTCGATCT GCAAGGCACG CCGGTCAAAT ACGGCTTCAC GCACTTCGCC
GCAGACCGCG TGCAACTGCT GGTGGAGCAC GACCTATGA
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| Protein sequence | MTSNDNATPG TMLERGAGVA VWRQIEQILA AEIAASGFGE EGRLPSEGEL AKRFDVNRHT
VRRAMLGLAA LGLVSVEQGR GTFVQPGAID YTIGRRTRFT ENLRQQHHAA AGTMLSAARV
KAEPSVAKAL SLRAGASVYR IESLHESDGV PLTFARNWYP AARFVDLPEV LERTGGITKA
MAEFGVNDYL RKWSRIGSVL PEPEVARRLN INRQQPVLWV ENVDVDLQGT PVKYGFTHFA
ADRVQLLVEH DL
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