Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5935 |
Symbol | |
ID | 6277620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2158617 |
End bp | 2159807 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642616998 |
Product | amidohydrolase |
Protein accession | YP_001889641 |
Protein GI | 187920609 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.456281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG CCGCGCGTTT TACCGAAGTG TCCGATCTGG CGCCCGCCGC CGAGAGCCTG CGCGAAATTC GCCATCACAT TCACCACCAC CCGGAACTCG CCTACGAGGA ACACCAGACG AGCGCGCTGG TCGCGCAGAA GCTCGAAGAA TGGGGCTGGC AGGTCACGCG CGGCGTCGGC AAGACGGGCG TGGTGGGCAC GTTGAAGGTG GGCGACGGCA AGCGCAGTAT CGGCATTCGC GCCGACATGG ACGCGCTGCC GATCATCGAG CAAACCGGCC TGCCGTACGC GAGCGGCACG CACGGCAAGA TGCACGCATG CGGCCACGAC GGCCACACCA CGATGCTGCT CGGCGCCGCG CAACGTCTCG CGGCCACGCG CAATTTTTCG GGCACGGTGC ATCTGTATTT TCAGCCGGCC GAGGAGAGCG GCATCGACAG CGGGGCGCTG AAGATGATCA ACGACGGCCT GTTCGAGCGC TTTCCGTGCG ACGCCGTGTT CGGCGTGCAC AACCATCCGG GCGAAGAACC GGGCGTGCTG TTGTTCCGCA AAGGGCCGTT CATGTCGGCG GGCGACAAGG CGATCGTCAC GATCGAAGGC GTCGGCGGCC ACGCGGCGCG TCCGCATCTG ACCGTCGATC CGGTCGTGGT GGCGGCGAGC ATCGTGATGG CGTTGCAAAC CATCGTCGCG CGTAACGTCG ATCCGTCGCA ACCGGCGGTG GTGACCGTCG GATCCATGCA TGCGGGCACC GCGAACAACG TCATTTCGAG CAGCGCGAAA CTGGAGTTGA GCGTGCGTTC ATTCAGCCCC GAAGTGCGCG CGCTGCTGAA AAAACGCATT ACCGAACTCG CCGAAAGTCA GGCCGCGAGC TATGGCGGCA AGGCGGTGGT GGAATACATC GAGGGCTATC CGGTGGTGGT CAATTCGGAT GCCGAAACGG ATTTCGCGGT GGAGGTGGCG CGCGAACTGG TCGGCGACGA CAAGGTGGTC GCGCAGACCG ACATCCTGAT GGGCAGCGAA GACTTCGCCT TCATGCTGCA AAAACGGCCG GGCACGTTCC TGCGCATCGG CAACGGCGCG GGCGAGGACG GCTGCATGGT GCACAACCCG CACTACGACT TCAACGACCG CAATCTGCCG GTCGGCGCGG CGTTCTGGAC GCGGCTGGTG GAGCGCTATC TGGGGCAGTG A
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Protein sequence | MSEAARFTEV SDLAPAAESL REIRHHIHHH PELAYEEHQT SALVAQKLEE WGWQVTRGVG KTGVVGTLKV GDGKRSIGIR ADMDALPIIE QTGLPYASGT HGKMHACGHD GHTTMLLGAA QRLAATRNFS GTVHLYFQPA EESGIDSGAL KMINDGLFER FPCDAVFGVH NHPGEEPGVL LFRKGPFMSA GDKAIVTIEG VGGHAARPHL TVDPVVVAAS IVMALQTIVA RNVDPSQPAV VTVGSMHAGT ANNVISSSAK LELSVRSFSP EVRALLKKRI TELAESQAAS YGGKAVVEYI EGYPVVVNSD AETDFAVEVA RELVGDDKVV AQTDILMGSE DFAFMLQKRP GTFLRIGNGA GEDGCMVHNP HYDFNDRNLP VGAAFWTRLV ERYLGQ
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