Gene Bphyt_5935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5935 
Symbol 
ID6277620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2158617 
End bp2159807 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content65% 
IMG OID642616998 
Productamidohydrolase 
Protein accessionYP_001889641 
Protein GI187920609 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.456281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG CCGCGCGTTT TACCGAAGTG TCCGATCTGG CGCCCGCCGC CGAGAGCCTG 
CGCGAAATTC GCCATCACAT TCACCACCAC CCGGAACTCG CCTACGAGGA ACACCAGACG
AGCGCGCTGG TCGCGCAGAA GCTCGAAGAA TGGGGCTGGC AGGTCACGCG CGGCGTCGGC
AAGACGGGCG TGGTGGGCAC GTTGAAGGTG GGCGACGGCA AGCGCAGTAT CGGCATTCGC
GCCGACATGG ACGCGCTGCC GATCATCGAG CAAACCGGCC TGCCGTACGC GAGCGGCACG
CACGGCAAGA TGCACGCATG CGGCCACGAC GGCCACACCA CGATGCTGCT CGGCGCCGCG
CAACGTCTCG CGGCCACGCG CAATTTTTCG GGCACGGTGC ATCTGTATTT TCAGCCGGCC
GAGGAGAGCG GCATCGACAG CGGGGCGCTG AAGATGATCA ACGACGGCCT GTTCGAGCGC
TTTCCGTGCG ACGCCGTGTT CGGCGTGCAC AACCATCCGG GCGAAGAACC GGGCGTGCTG
TTGTTCCGCA AAGGGCCGTT CATGTCGGCG GGCGACAAGG CGATCGTCAC GATCGAAGGC
GTCGGCGGCC ACGCGGCGCG TCCGCATCTG ACCGTCGATC CGGTCGTGGT GGCGGCGAGC
ATCGTGATGG CGTTGCAAAC CATCGTCGCG CGTAACGTCG ATCCGTCGCA ACCGGCGGTG
GTGACCGTCG GATCCATGCA TGCGGGCACC GCGAACAACG TCATTTCGAG CAGCGCGAAA
CTGGAGTTGA GCGTGCGTTC ATTCAGCCCC GAAGTGCGCG CGCTGCTGAA AAAACGCATT
ACCGAACTCG CCGAAAGTCA GGCCGCGAGC TATGGCGGCA AGGCGGTGGT GGAATACATC
GAGGGCTATC CGGTGGTGGT CAATTCGGAT GCCGAAACGG ATTTCGCGGT GGAGGTGGCG
CGCGAACTGG TCGGCGACGA CAAGGTGGTC GCGCAGACCG ACATCCTGAT GGGCAGCGAA
GACTTCGCCT TCATGCTGCA AAAACGGCCG GGCACGTTCC TGCGCATCGG CAACGGCGCG
GGCGAGGACG GCTGCATGGT GCACAACCCG CACTACGACT TCAACGACCG CAATCTGCCG
GTCGGCGCGG CGTTCTGGAC GCGGCTGGTG GAGCGCTATC TGGGGCAGTG A
 
Protein sequence
MSEAARFTEV SDLAPAAESL REIRHHIHHH PELAYEEHQT SALVAQKLEE WGWQVTRGVG 
KTGVVGTLKV GDGKRSIGIR ADMDALPIIE QTGLPYASGT HGKMHACGHD GHTTMLLGAA
QRLAATRNFS GTVHLYFQPA EESGIDSGAL KMINDGLFER FPCDAVFGVH NHPGEEPGVL
LFRKGPFMSA GDKAIVTIEG VGGHAARPHL TVDPVVVAAS IVMALQTIVA RNVDPSQPAV
VTVGSMHAGT ANNVISSSAK LELSVRSFSP EVRALLKKRI TELAESQAAS YGGKAVVEYI
EGYPVVVNSD AETDFAVEVA RELVGDDKVV AQTDILMGSE DFAFMLQKRP GTFLRIGNGA
GEDGCMVHNP HYDFNDRNLP VGAAFWTRLV ERYLGQ