| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5930 |
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| Symbol | |
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| ID | 6278566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2153183 |
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| End bp | 2154493 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616993 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_001889636 |
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| Protein GI | 187920604 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTA CAACGAAACG CGCGCTGCTC GGCTGCATCG CTGACGACTT CACCGGCGCC
ACCGATCTCG CCAACATGCT GGTGCGCGGC GGCATGCGTA CGGTGCAAAC CATCGGCGTG
CCCGCATCGA ATGAAACGGT GGAGGCCGAC GCGCTGGTGG TTGCGCTGAA ATCGCGCACC
ATTCCCGCCG CCGACGCGGT CGCGCAATCG CTCGCCGCGC TCGACTGGTT GCGCGCGCAA
GGCTGCCGGC AGTTCTTTTT CAAATACTGC TCGACCTTCG ATTCGACCGA CGCGGGCAAT
ATCGGCCCGG TCACGGATGC GCTACTCGAC GCATTGTCCG CCGAAGGCAA AGCCGGCGCG
TTCACGATCG CCTGTCCCGC ATTTCCTGAG AACGGCCGCA CGATCTTTCG CGGGCATCTG
TTCGTCGGCG ACACGTTGCT CAATGCGTCG GGCATGGAGA ACCATCCGCT CACGCCGATG
CGCGACGCGA ACCTCGTGAG CGTGCTGCAG CGGCAGACCG AATCGAAAGT CGGGCTCGTG
CGTTATGACG CCGTGGCGCA GGGCGTGTCC GCTGTGCGCG ACGCGTTCGA TACGTTGCGC
AACGAAGGCG TGCGCATGGC GATCGCCGAT GCGGTGTCCG ATGCCGACCT CTACGTGCTC
GGCGAAGCGT GCGCCGATCT CACGTTGATC ACAGGCGGCT CAGGTATCGC GCTGGGTTTG
CCGGCCAACT TCCGCCGCGC GGGTTTGCTC AAGGAGCAGG CCGATGCCGC GCAATTGCCT
CAGGTGAAGG GATTGTCGGC GGTGCTGGCC GGCAGCGCAT CCAAAGCGAC CAACGAACAG
GTCGCGCAAT GGCGCTCTGC ACGGCCCGCT TTCCGCGTCG ATCCGCTTGC GGCTGCGCGT
GGCGAGAACG TCGTCGAGCA GGCGCTGGCT TTTGCCCAAC CGTACCTCGA CAAAGCCGAG
CCCATGTTGA TCTATGCCAC GGCCACGCCC GACGAAGTCA AGGCGGTACA ACGCCAACTC
GGCGTGAACG AAGCAGGGCA TCTGGTTGAA AACACGTTGG CGTCGATCGC GCGAGGTCTG
CACGAACGCG GCGTGCGCAA GTTCGTGGTG GCGGGTGGCG AGACCTCGGG CGCCGTGGTG
CAGGCGCTCG ACGTGCACAC GCTGCGCATC GGCGCGCAGA TCGATCCCGG CGTGCCGGCC
ACCGCCACGA CCGGCGCCGA ACCGCTCGCG CTCGCATTGA AATCCGGCAA CTTCGGCACG
GCCGACTTCT TCGAAAAAGC GCTGCGGCAT CTGAACGGAG CCGCGCAATG A
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| Protein sequence | MTATTKRALL GCIADDFTGA TDLANMLVRG GMRTVQTIGV PASNETVEAD ALVVALKSRT
IPAADAVAQS LAALDWLRAQ GCRQFFFKYC STFDSTDAGN IGPVTDALLD ALSAEGKAGA
FTIACPAFPE NGRTIFRGHL FVGDTLLNAS GMENHPLTPM RDANLVSVLQ RQTESKVGLV
RYDAVAQGVS AVRDAFDTLR NEGVRMAIAD AVSDADLYVL GEACADLTLI TGGSGIALGL
PANFRRAGLL KEQADAAQLP QVKGLSAVLA GSASKATNEQ VAQWRSARPA FRVDPLAAAR
GENVVEQALA FAQPYLDKAE PMLIYATATP DEVKAVQRQL GVNEAGHLVE NTLASIARGL
HERGVRKFVV AGGETSGAVV QALDVHTLRI GAQIDPGVPA TATTGAEPLA LALKSGNFGT
ADFFEKALRH LNGAAQ
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