Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5925 |
Symbol | |
ID | 6279341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2147661 |
End bp | 2148863 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616988 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_001889631 |
Protein GI | 187920599 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG CATTCCTGTG CGACGCGATT CGCACCCCCA TCGGCCGCTA TGCGGGTTCG CTCTCGTCGG TACGCGCCGA CGATCTGGGC GCCGTCCCGC TCAAGGCGCT GATGGAGCGC AATAAGGACG TCGACTGGAA CGCCATCGAC GACGTGATCT ACGGCTGTGC GAACCAGGCC GGCGAAGACA ACCGCAATGT CGCGCGCATG TCGCTGTTGC TCGCCGGCTT GCCGCAGGGC GTGCCGGGCA CGACGGTGAA CCGCCTGTGC GGTTCGGGTA TGGACGCGGT CGGCATCGCG GCGCGCGCGA TCAAATCGGG CGAGGCCGCG CTGATGGTGG CAGGCGGCGT GGAAAGCATG AGCCGCGCGC CGTTCGTGAT GGGCAAGGCG CCCACCGCGT TTTCGCGCCA GGCCGAGATT TATGACACGA CCATCGGCTG GCGTTTCGTC AATCCGCTGA TGAAGAAACT GTACGGCGTC GATTCCATGC CGGAAACGGG CGAGAACGTC GCCACGGATT ACAACATCAG CCGCGCGGAT CAGGACGCTT TCGCGGTGCG CAGCCAGCAG AAAGCGGCGC GCGCGCAACG CGACGGCACG CTCGCGCAGG AAATCGTCGG CGTGACGATC GCACAGAAGA AGGGCGATCC GATCACGGTG CTGCAAGACG AGCATCCGCG TGAGACCAGC CTCGAAACGC TCGCCAAGCT CAAAGGCGTG GTGCGTCCGG ACGGCACGGT TACGGCAGGC AACGCGTCGG GCGTGAACGA CGGCGCGGCG GCCCTGCTGC TCGCAAATGA AGAGACTGCC AGGCGCTTCG GCCTGACGCC GCGCGCCCGC GTGCTGGGTA TCGCCACGGC CGGCGTCGCG CCGCGCGTGA TGGGCATTGG CCCGGCACCC GCCACGCAAA AACTGCTGGC GCGCCTGAAC ATGACCATCG ATCAATTCGA CGTGATCGAA CTGAACGAGG CGTTCGCTTC GCAAGGCATC GCGGTGCTGC GCGCACTCGG CGTGGCCGAC GACGACGCCC GCGTCAATCC GAACGGCGGC GCGATCGCAT TGGGCCATCC GCTCGGCATG AGCGGCGCGC GTCTCGTGAC CACCGCGATG TATCAACTGC ATCGCACGCA AGGCCGTTTT GCGCTGTGCA CGATGTGTAT CGGCGTCGGT CAGGGCATTG CGATCGCGAT CGAGCGGGTG TGA
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Protein sequence | MTEAFLCDAI RTPIGRYAGS LSSVRADDLG AVPLKALMER NKDVDWNAID DVIYGCANQA GEDNRNVARM SLLLAGLPQG VPGTTVNRLC GSGMDAVGIA ARAIKSGEAA LMVAGGVESM SRAPFVMGKA PTAFSRQAEI YDTTIGWRFV NPLMKKLYGV DSMPETGENV ATDYNISRAD QDAFAVRSQQ KAARAQRDGT LAQEIVGVTI AQKKGDPITV LQDEHPRETS LETLAKLKGV VRPDGTVTAG NASGVNDGAA ALLLANEETA RRFGLTPRAR VLGIATAGVA PRVMGIGPAP ATQKLLARLN MTIDQFDVIE LNEAFASQGI AVLRALGVAD DDARVNPNGG AIALGHPLGM SGARLVTTAM YQLHRTQGRF ALCTMCIGVG QGIAIAIERV
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