Gene Bphyt_5898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5898 
Symbol 
ID6280324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2116859 
End bp2117857 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content70% 
IMG OID642616961 
ProductPeptidase M23 
Protein accessionYP_001889604 
Protein GI187920572 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.941404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCG CGTTTCGCGC CGGCAGTCAG CTGGCCAGCG GCTCGGTCAG TTTCGTCACG 
CGCCGTACCG CATTGACGCT CGCCTTGGGC GCGGCCGGCG GCACGGCCGT GCTGGCGCTC
GCCGTGGGCG CCGCGATCGG TGCGCACTGG TCCGCGCGCC ACGGGTCCGG CGATCAAGCG
GCGGTCCGCG TCGAGCACGA CTATGCAATC GACCAACTCG GCAAGCTGAA CGCGTCGATG
GCGCAGATCG AACCGCGCAT CGCGCGACTC ACGGCGCAGG TTGGCGACTT GCGCGATTTC
GAGGCGCGCC TGAACACGCC GCGGCCCGCG CCGCGCGCAT CGGCGGCGCG CGCCGCATGG
GGTGCGGCGT CTGCAGCTTC CGAACCGGAC ACCTCCGCCA CTGACGGCGA AGGCGAAGAC
GAAGGCGAGG GCGGCCCAGC TTTGCCGCCG CGCCGCTGTA GCGACCTCGC GCCCTTGCTG
GGCCGCCATG CCGATGCCGA ACGCACCGGC CAGCAACTCG ATTGCCTGGC CGCGACCCTC
TCGGCGCTCG AACGGCAGAC CGCCGAGCAC GCCGTCGCGT ACGCCGCCTT TCCGGGCCGC
ATGCCGGCCG ACGGCGCGCG CTTCGGGTCG CCGTTCGGCA ATCGGACCGA TCCGTTCACA
CATCGGTTGA GCTTTCATCC GGGGCTCGAT CTGGTCGCTA AAACCGGCAC GGCGATTCTG
GCGGCCGCGG GCGGGCGCGT GGTCTACGCT GGCGAGAAAT CGGGCTATGG CAACGCGGTT
GAAATCGATC ACGGCAACGG GCTCATGACT CGCTACGGCC ATGCGTCGCG GATCGTCGTG
CATGTCGGTG ATCTGGTGCT GCCGCGGCAG TACATCGCCG ATGTCGGCTC GACCGGCCGT
TCCACTGGCC CGCATCTGCA TTTCGAAGTT CTCGTCGACG GCGCGCCGGT CAACCCGGCG
GCCTACCTCG CGCTCTTTGC GCCGACGGCT CATGGCTGA
 
Protein sequence
MASAFRAGSQ LASGSVSFVT RRTALTLALG AAGGTAVLAL AVGAAIGAHW SARHGSGDQA 
AVRVEHDYAI DQLGKLNASM AQIEPRIARL TAQVGDLRDF EARLNTPRPA PRASAARAAW
GAASAASEPD TSATDGEGED EGEGGPALPP RRCSDLAPLL GRHADAERTG QQLDCLAATL
SALERQTAEH AVAYAAFPGR MPADGARFGS PFGNRTDPFT HRLSFHPGLD LVAKTGTAIL
AAAGGRVVYA GEKSGYGNAV EIDHGNGLMT RYGHASRIVV HVGDLVLPRQ YIADVGSTGR
STGPHLHFEV LVDGAPVNPA AYLALFAPTA HG