| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5896 |
|---|
| Symbol | |
|---|
| ID | 6277472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2115858 |
|---|
| End bp | 2116292 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642616959 |
|---|
| Product | protein of unknown function DUF583 |
|---|
| Protein accession | YP_001889602 |
|---|
| Protein GI | 187920570 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACA AGAAGAAAAC CGCGGGCATC CAGCAGACCA AGCTCGCCAC CCTGATCGCG
CACGACGTGC GAATCACCGG CGACCTGCAG TTCAGCGACG GCCTGCGCAT GGACGGCCAC
GTGACGGGCA ACGTCAGCGG CGAGCCGGGC GGCCAGACGC TTCTGGTCCT GAGCGACCGT
GGCTCGATCG AAGGCAGCGT GCACGGCTAC GACGTCGTGA TCAACGGCCG GATCGTCGGC
GACGTGATTG CGGATCACTT CGTCGAGTTG CAAAGCAATG CGCACGTGAC CGGCAACATC
TACTACCAGC AGTTGCGGAT GGATTGCGGC GCCTCGGTGG ACGGCAAGCT CACCAAGCGC
GACGCGGCGC AGGCGGCGAC GCCGCTTCTG GTGTCGGTGG CCGACAGCGC CTTCGACGAG
CGCAAGGCCG GTTAG
|
|---|
| Protein sequence | MFNKKKTAGI QQTKLATLIA HDVRITGDLQ FSDGLRMDGH VTGNVSGEPG GQTLLVLSDR
GSIEGSVHGY DVVINGRIVG DVIADHFVEL QSNAHVTGNI YYQQLRMDCG ASVDGKLTKR
DAAQAATPLL VSVADSAFDE RKAG
|
|---|
| |