Gene Bphyt_5889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5889 
Symbol 
ID6278886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2107267 
End bp2108481 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content63% 
IMG OID642616952 
Producthypothetical protein 
Protein accessionYP_001889595 
Protein GI187920563 
COG category[S] Function unknown 
COG ID[COG4320] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATA TCGTCAGCAC GATCGCCAGC TTTAACGCCG GTCGCGATCC CGAACGGCTC 
GCGATGAAAT ACAAAGCCAT GCGCACGTCG CCGTTCGTGT TTTTGCGCGG CACGTGTCAC
CTGTTTTACG AGCGCCTGCC GCGCGACAAG GTGTTCGACG ACGCGCCGCC GGTGTGGATC
TGCGGCGACA TGCATCTGGA AAATTTCGGC AGCTACAAGG GCGACAACCG GCTCATCTAC
TTCGACAACA ACGACTTCGA CGAAGCCTGC CTCGCGCCGA ATCTCTACGA ACTGGTGCGT
CTGTTGACGA GCGTGCTGGT CGGCGCGAGC GATCTCAAGC TGAGCCGCGC GCAGGCGCTG
GGGCTGTGCC ACACCGCGCT GGAAAAATAT GGCGCGGCGC TGGCGCATGG CAAGGCGCGC
TGGATCGAAG CGGAAACTGC AACCGGCATG GTGCGCGATC TGTTCGTCGC GCTTGCAAGC
CGCACGCGGG CGGCGCATCT GGACCGGCGC ACGGTGCTCA AAGGCAAGAC CCGCATGCTG
AAAGTGGACG GCAAAAAAGC GCTGGCGGTC AGCGACGCGC AGCGTGCCGC CGTCACGCAG
TTCATGCAGA AGTTTGCCGC GGGCGAGCCC AATCCTGATT TCTTCCGCAT TCTCGACGTG
GCGCGGCGCA TTGCCGGCAC GGGGAGCCTC GGCGTGGATC GTTACGTGAT TCTCGTCGAA
GGCAAAGGCT CGCCTGACGG CAACTATCTG ATCGATCTGA AAGAGGCGCT GCCTTCTTCC
GTGACACCGC ACGTGAGCAC GCCACAACCG GCGTGGCAGA CAGAAGCGCA ACGCGTCGTC
GAAATTCAGC GGCGCAATCA GGCGGTCTCG CAGGCGTTCC TGCATGCGGT CGAATTCAAT
CAGCGTTCGT ATGTGCTGCG CAGCCTGCAA CCTTCGGAAG ATCGCGTGGC CTTGAGCGAC
TGGGACGGCA AGCTGCCGCG TCTCGAAGCG GTGGTCAGCA GCATGGCCGA GTTGAGTGCG
TGGGCGCATC TGCGCAGCGG CGGGCGGCAG AAGTCGTCGA TCGCCGACGA TCTGATCGCG
TTCGGCAATC GCCAGGACTG GCAAGTGCCG TTGTTGGGAA TCGCGACGCA GTGCGAGGCG
CAGGTGGCGG CGGACTGGAA AACCTACTGC GACGCCTACG ACAACGGTGC GTTCAACCTG
AGCGCGAAGC CGTGA
 
Protein sequence
MLDIVSTIAS FNAGRDPERL AMKYKAMRTS PFVFLRGTCH LFYERLPRDK VFDDAPPVWI 
CGDMHLENFG SYKGDNRLIY FDNNDFDEAC LAPNLYELVR LLTSVLVGAS DLKLSRAQAL
GLCHTALEKY GAALAHGKAR WIEAETATGM VRDLFVALAS RTRAAHLDRR TVLKGKTRML
KVDGKKALAV SDAQRAAVTQ FMQKFAAGEP NPDFFRILDV ARRIAGTGSL GVDRYVILVE
GKGSPDGNYL IDLKEALPSS VTPHVSTPQP AWQTEAQRVV EIQRRNQAVS QAFLHAVEFN
QRSYVLRSLQ PSEDRVALSD WDGKLPRLEA VVSSMAELSA WAHLRSGGRQ KSSIADDLIA
FGNRQDWQVP LLGIATQCEA QVAADWKTYC DAYDNGAFNL SAKP