| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5886 |
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| Symbol | |
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| ID | 6277611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2103300 |
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| End bp | 2104244 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616949 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001889592 |
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| Protein GI | 187920560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCGC TCAAGTTGCC GGCCGGAGGG TCGTCCAAGG CCCATCGGAT GCGGCTGAAA
AAGCCGCTCA AAAAGCGCTT TCCGATTGCG GCGTGGCTCG CGCTGCTGCC AATGGTCATG
ACCGTCGTCT TCGCCTATCT CGGCACGATG GTCTGGACCG CGCGCGTGTC GCTCAGCAAT
TCGCGCACAT TTCCGTCCGG CGACTTCGCG GGTTTCACGC AATACGCGCG GCTCTTCAAT
AACGACCGCT GGCTGCTGTC GTTGCAGAAC ATCGTGATCT ACGGCGCGTG CTTTATCGTG
GCGTGCATGG TGATCGGTTT GCTGCTGGCG ATTTTCATCG ATCAGCGCGT GGTCGCCGAA
GGCGCGTTGC GCACGGTGTT TCTCTATCCG TATGCAATGT CGTTCGTGGC GACGGGGCTC
GTGTGGCAGT GGATCCTGAA CCCGGAACTG GGCGCGCAGG CCGTGCTGCA CAAGCTCGGA
TTCGCACACG CGCGTTTCGA CTGGATCGTC GATCAGGACT GGGTGATTTA CACCATCGTG
ATCGCGACCG TGTGGCAGGC CTCGGGTCTG GTGATGGCGT TGTTGCTGGC GGGCCTGCGC
GGCATCGACG ACGAGTTGTG GAAAGCCGCG CGCATCGACG GCATTCCGCG TTGGCGGGTC
TACGTCAGCA TCGTCGTGCC GATGCTGGGG CCATCCATCT CCACTGCTTT CGTGCTGCTG
TTCGTGATGG TCGTGAAGCT CTACGACGCG GTGGTCGCGA TGACGCAAGG CGGCCCCGGC
ACGGCGAGCG AAGTGCCGGC GAAGTTCATC ATGGACTATC TGTTCGGCCG CGCCAATATC
GGGCTCGCTT CGGCGGCGTC GATCGTGTTG CTGGCCACCG TGCTGGCGAT TCTCGCGCCG
TTCTTCTATG CCCGCAGCCG TGCGGCCCTG CGTAAGGAGG TGTGA
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| Protein sequence | MHALKLPAGG SSKAHRMRLK KPLKKRFPIA AWLALLPMVM TVVFAYLGTM VWTARVSLSN
SRTFPSGDFA GFTQYARLFN NDRWLLSLQN IVIYGACFIV ACMVIGLLLA IFIDQRVVAE
GALRTVFLYP YAMSFVATGL VWQWILNPEL GAQAVLHKLG FAHARFDWIV DQDWVIYTIV
IATVWQASGL VMALLLAGLR GIDDELWKAA RIDGIPRWRV YVSIVVPMLG PSISTAFVLL
FVMVVKLYDA VVAMTQGGPG TASEVPAKFI MDYLFGRANI GLASAASIVL LATVLAILAP
FFYARSRAAL RKEV
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