| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5881 |
|---|
| Symbol | |
|---|
| ID | 6278517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2096760 |
|---|
| End bp | 2098472 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642616944 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_001889587 |
|---|
| Protein GI | 187920555 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGATT TTCTGGCGGC TATCACGGCA CGTGTCAGCG TGCTGAAGGG CGTCCTTCCT
CTGAACCGCG CCGCGGCGGC GCGCGATGCG CTGGCCGGTG TGCAGCTTGC GTCGATGGAT
ATTCCGCAAG TGCTCGGCTA CGCGCGTATT GCCGGCATGC CGGCTGTGAC TGGCCTGTAC
ACGGTCTTTC TTCCGCTGAT CGCCTTTGCG TTTTTCGGTG CCTCGCGGCA TCTGGTCGTG
GCCGCCGACT CCGCGACCGC CACCATCTTC GCAAGCCGGC TTGCCACCAT GGCGCCGGCC
TCAAGCGCTG AATATGCCGC GCTCGCCGCG ATAGTCGCCT TGCAGACCGC TGCCTTGCTG
TTCATCGCGC GGATTTTCAA GCTGGGCTTT CTCGCCGATT TTCTGTCGCG TACCGTGCTG
GTCGGATTTC TCGCCGGCGT CGGCGTGCAG GTCGGCATTG CGATGCTCGG CGACATGTTC
GGCTTGCCCG GACACGCCGC GCGCAGCGTC GATCAGCTCG TGCTGGTGGT GCGCGAAGCC
GCGCAGATCA ATCGGCCGAC GCTCGCCATT TCGCTGCTGG TGGTCGTCGC CATTCTGACG
TGCAAACGCT TTCTGCCACG CGTGCCGGTG CCGTTGATCG CGGTCGTGGC GGGCATTGCC
GCGAGCGATC TCTGTCGCTT CCCGGCCCAC GGCATCGCCG TGCTCGGCCC GGTCGCGGGT
GGGTTGCCGC CACTGCGCGT GCCGTCGGTG ACATGGCAGC AGATGCTCGA TCTGCTGCCC
GTGGCGGCGT CCTGCTTTGT GATGATCGTC GCGCAGAGCG CCGCCGCGAG CCGCGTGTTC
GCCGAGCGTC ATCACGAGCC CGTTGATACC AACGCCGACT TGCTGGGCAT CGCCGCGGCC
AATGCGGCGG CGGCGTTTTC AGGCGCCTTC GTGGTGAACG GCAGCCCGAC GCAAACCGCC
ATGGCCGATC TCGCCGGCAC GCGCAGCCAG TTCGCGCAGT TGGTCTTCGC GGCGGTGGTG
GTGGCGGTGC TGCTGTTTTT CAGCCGCTTT TTGCAGTATC TGCCGCACTG CATTCTGGCC
AGCATCGTGT TTACGATCGC CATCGGCCTG ATCAATCTGA AGACCTTGTT TGCGATCCGC
CGCGAGAGTC CCGGCGAATT CTCACTGGCC GTGTTCACCG CGGCGGCCGT GGTGCTGATC
GGCGTCGAGC ACGGCATTCT GGTGGCGGTG GCGCTCTCGC TGCTGCGTCA CGTGCGCCAC
AGCTACCGTC CGCATACGAT GATTCTCGCT CCCGGCGACG ATGGCGTCTG GGTGCCGGTG
CCCGCCGTGC CCGGCATTCA GACCGCGCCG GGTATGATCG TCTACCGCTT CGGCGCCGAT
CTGTTTTACG CGAACGACCA CTTTTTCGTC GACGATACGC GGCGCCTGAT CGACCTCGCC
CCGAGCAAGG TGCGCTGTTT CGTGATCGAC GCAAGCGCGA TCACCGACAT CGACTATTCG
GCCTCACGCT CGATCGGCGA GTTGTGCCAG ACGTTGAAGA GCGAAGGCAT CGAGGTCCTG
TTCGCGCGCG TGAACCGCTA TTTGCGTTCG GACATGGACC GGCACGGCAT CACGCCGATC
GTCGGGGAAG GTTGCATCTT CAACACGTTG CACGAAGCGC TGCGCACGGC CGGTGTGGAG
AAGCCGGACC GGCATGTGAA AGAGGCTACG TAA
|
|---|
| Protein sequence | MRDFLAAITA RVSVLKGVLP LNRAAAARDA LAGVQLASMD IPQVLGYARI AGMPAVTGLY
TVFLPLIAFA FFGASRHLVV AADSATATIF ASRLATMAPA SSAEYAALAA IVALQTAALL
FIARIFKLGF LADFLSRTVL VGFLAGVGVQ VGIAMLGDMF GLPGHAARSV DQLVLVVREA
AQINRPTLAI SLLVVVAILT CKRFLPRVPV PLIAVVAGIA ASDLCRFPAH GIAVLGPVAG
GLPPLRVPSV TWQQMLDLLP VAASCFVMIV AQSAAASRVF AERHHEPVDT NADLLGIAAA
NAAAAFSGAF VVNGSPTQTA MADLAGTRSQ FAQLVFAAVV VAVLLFFSRF LQYLPHCILA
SIVFTIAIGL INLKTLFAIR RESPGEFSLA VFTAAAVVLI GVEHGILVAV ALSLLRHVRH
SYRPHTMILA PGDDGVWVPV PAVPGIQTAP GMIVYRFGAD LFYANDHFFV DDTRRLIDLA
PSKVRCFVID ASAITDIDYS ASRSIGELCQ TLKSEGIEVL FARVNRYLRS DMDRHGITPI
VGEGCIFNTL HEALRTAGVE KPDRHVKEAT
|
|---|
| |