| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5867 |
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| Symbol | |
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| ID | 6277431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2080883 |
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| End bp | 2081617 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616930 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889573 |
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| Protein GI | 187920541 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC TGAATGGAAA GACCGCCGTG ATCACCGGTG GCGCTACCGG CATCGGCCGG
GCAGCAGCAA AGCGTTTTAT CGAGGAAGGC GCCTTCGTCT TCATCTTCGG CCGGCGGCAG
GAAGCACTCG ACGCCGCAGT AGCCGAGCTC GGGCCCAATG CCCGCGCGGT GAAGGGCTCG
GTCTCCGATC CCGCCGACCT CGACCGACTT TACTCGGCGG TGAAGGCCGA GCGCGGAACC
CTCGACATCG TTTTCGCCAA CGCCGGGACG GGAGGCCTGC TTGCGCTGGG CAAGATCACC
GCCGAGCACA TCGACGAAAC TTTCGACACC AACGTAAAGG GGGCGATCTT CACCGTACAG
CAGGCGCTGC CGCTGATGGG CAAGGGTGGT TCGATCATCC TGACCGGATC GAGCGCCGGC
ACCACGGGCG CCCCGGCAAT GAGCGCCTAC AGCGCGAGCA AGGCGGCAGT GCGCAACCTC
GCACGGACCT GGGCGGAGGA ATTGAAGGGC ACCGGCATCC GGGTCAACGT GCTGTCACCC
GGGGCGACGG CGACCGAACT CGCTAAGGAA GCGCTAGGCG AAGAAGGCCA GAAGGTCTTC
GCCTCGATGA CTCCGCTCCA GCGCATGGCC GATCCGGCAG AGATCGCAGC AGCGGCCGCC
TTTCTCGCGT CGCCGGACAG CAGCTTCATG ACCGCCAGCG AGGTTGCCGT CGACGGCGGC
CTGGCGCAAC TCTGA
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| Protein sequence | MNRLNGKTAV ITGGATGIGR AAAKRFIEEG AFVFIFGRRQ EALDAAVAEL GPNARAVKGS
VSDPADLDRL YSAVKAERGT LDIVFANAGT GGLLALGKIT AEHIDETFDT NVKGAIFTVQ
QALPLMGKGG SIILTGSSAG TTGAPAMSAY SASKAAVRNL ARTWAEELKG TGIRVNVLSP
GATATELAKE ALGEEGQKVF ASMTPLQRMA DPAEIAAAAA FLASPDSSFM TASEVAVDGG
LAQL
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