| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5857 |
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| Symbol | |
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| ID | 6279226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2071659 |
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| End bp | 2072684 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616921 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001889564 |
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| Protein GI | 187920532 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGC TTGAGAACAA CAATATCGCG CTGGGCGCGG ATTTTCTGCG GCACGAGATG
ACACCCGCGG CATCTGCCGC GGCCGGGGTG GAAGGTTACA TGGAGCACGA TGCGGCTGTC
TACCGCACGC TGCTCGAATC GACCAAGGCG ATTCCATGGA AGATCGACTG GGCGACCATG
GAGTTCGCCT ATATCGGCCC GCAGATCGAA GCCTTGCTGG GCTGGGCGCC GTCGAGCTGG
AAGACCGTGC AGGACTGGGC CGCGCGCATG CATCCCGAGG ACCGCGAGAA GGTGGTCGAA
TTCTGTGTCG CGCAATCGCA GGCGGGCACC GATCACGAAG CGGACTACCG CGCGTTGACG
AGCCGGGGTG AATACGTGTG GCTGCGCGAC GTGGTGCATG TGGTGCGCGA CGCGCGCGGC
GACGTGGAGT CGCTGGTCGG CTTCATGTTC GATATCAGCG AGCGCAAGAA GACCGAGGAG
AAGCTGGCCG CGTTGCAACG GGAACTCGAG GCGCTGTCGT TCAAGGACAG CCTGACGGGT
GTCGGTAATC GCCGCGCGTT CGACGCCAGC CTGGAGCGCG AATGGAGTGC GGCTTTGCGT
CACGCGGCGC CGCTTTCGCT GGTGATGGTC GATATCGACT TCTTCAAGTC GTACAACGAC
TACTACGGCC ACGTGCAGGG CGACGAGTGC CTGAGGCGGG TGGCGGGCGT GCTGAGCAGC
GCGGTGCGGC CGGGCGACTT TGTCGGCCGC TTCGGCGGGG AAGAGTTCGT GCTGCTCCTG
CCGAACACCG GCGCCGACGC CGCTCGCCAG GTGGCCGAGC GTTGCCGCAA CCGCATTGCG
GCTGAAGAGA TCGCGCATGA GCGCTCGCCG TTCCGGCAGA CGGTGACCGC CAGCTTCGGC
GTCGGCACCA CGATTCCGGC CGGCGCAGCC GATCCGGTGG CTTTCGTCAA TCTGGTCGAT
ACGCAGCTGT ACCACGCGAA GGACAACGGC CGCGATTGCA TTGCGGCGGT GAACCGCGTG
GGATGA
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| Protein sequence | MNRLENNNIA LGADFLRHEM TPAASAAAGV EGYMEHDAAV YRTLLESTKA IPWKIDWATM
EFAYIGPQIE ALLGWAPSSW KTVQDWAARM HPEDREKVVE FCVAQSQAGT DHEADYRALT
SRGEYVWLRD VVHVVRDARG DVESLVGFMF DISERKKTEE KLAALQRELE ALSFKDSLTG
VGNRRAFDAS LEREWSAALR HAAPLSLVMV DIDFFKSYND YYGHVQGDEC LRRVAGVLSS
AVRPGDFVGR FGGEEFVLLL PNTGADAARQ VAERCRNRIA AEEIAHERSP FRQTVTASFG
VGTTIPAGAA DPVAFVNLVD TQLYHAKDNG RDCIAAVNRV G
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