Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5841 |
Symbol | |
ID | 6278958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2052974 |
End bp | 2055637 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616905 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001889548 |
Protein GI | 187920516 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.111175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTTC CGGCACACGA CCACGGCTGC TCCGGCTGGC GCGGGGAGAT GGCGCAGCGC ATCAGCGCAT TCGACTGGGC CGCCACCGGC CTCGGCGCCA TCGAAAACTG GCCGCGCAGT CTGACCGCGA CCGTCCAGTT GCTGCTCGCC TCGCCCGTGC CTCTGGTGCT GCTGTGGGGC AAGCCCGGCT ACATGATCTA CAACGACGCC TACGCGGTCT TCGCAGGCGG CAGGCATCCC TATCTGCTCG GCTGCCCGGT CGAACACGGC TGGCCGGAAG TCGCCGATTT TAACCGGCAT GTCATGGCCA CGTGTCTCGC GGGCGGCACG CTGTCGTATC GCGACAAGGA GTTGGTGCTG CTGCGCGACG GCAAACCCGA AGACGTGTGG ATGGATCTCT ACTACAGCCC CGTCGCCGAC GACAGCGGCG CGCCGGCCGG TGTGCTGGCG GTAGTCGTCG AAACCACCAC GCGCGTGCTC ACCGAACGCT GGCGGCAGCG CGCCGAAGCC GAACTGCACG AGACCAACGA ACGGCTGCAG CTCGCGCTCA ATACCGGCAC GGTGCTCGGC ACCTGGGTGC TGGACGTGCG CACGGGCAAG GTCAGCGGCG ACGAACGTTT CGCGCGCACT TTTTCCTTTC GGCAGGAAGA AGCCGCGAAA GGAGTCGAGC GCCACGCCGC CGTCCACATG ATTCATCCGG ACGACCAGGC GCTCAACGAC CAACTGACCG CCGAGGCGAT CCGCACACGG CAGCCGTTTC GCGCCGAGTT TCGAATCCGG CGGCCCGACG GCGACTACAT CTGGGTGCAG GCAAACGGCC AGTGCGAGTT CGACGAGCAT GGCGAACCGA CGCGTTTTCC CGGCGTGCTG ATCGATATTC ACGAACGCAA GATCGCCGAA CAGTCGCTGC GCCAGTTGAC CGAGACGCTC GAACAGCGCG TCGCCGACGC GCTCGCGGCG CGCGCTTTGG CCGAGGAACA ATTGCGCCAG GCGCAGAAGA TGGAAGCGAT CGGCAGCCTC ACGGGCGGCG TCGCGCACGA CTTCAACAAC GTGCTGCAGG TGATCAACGG CAACCTGCAA ATGCTCGCCG CCGATGCCGG CGGCCACCCG GCCACCCTAC GCCGCCTGTC CGCCGCAACG GACGCGGTCA AGCGCGGCGC GAAACTGGCC GCGCATCTGC TCGCCTTCGC GCGGCGCCAG CCGCTCTCTC CCACTGTGCT GAATCCGCGC CGCCTGCTGA GCGGCATGAG CGAGATGCTG CATCGCGCAC TCGGCGAAAC CGTGCGCATC GACACGGTCC TGAACGACGA TCTGTGGAAC GTGCAGGCCG ATCGCAATCA ACTGGAAAAC GCGCTGCTCA ATCTCGCGAT CAACGCGCGC GACGCCATGC AAGGAGACGG CACGCTCACC GTGCGAGCGG CCAACCGCGT GCTGGACACC ACGTTCTGCC AGGACAAACC CGAACTGTCG CCGGGTGAAT ACGTGGTGTT TTCCGTCGCC GACAGCGGCG CCGGCATGCC GCCCGAGATC CTGCAACGCG TGTTCGAACC GTTTTTCACG ACCAAGCCCG ACGGCCACGG CACCGGCCTC GGCCTGAGCA TGGTGTTCGG CTTTCTCAGG CAAAGCGGTG GCCATACGTT GATCGAGAGC GAAGTGGGAC GCGGCACTAC GGTCTCGCTG TTTTTCCCGC GCTGCTGCGA AGCCGAAACC TCGGAAGCGG TCGACGACAC CGAGGCGCCC AGCGGCGGCG GCGAAACGAT TCTGGTCGTC GAAGACGATG CCGACGTGCG CCTGACCGCC GTCGAAATGC TCGCGCAACT CGGCTACAAG GTGCTGACCG CGTCGAGCGG CGACGCGGCG ATCGAATTCA TCGAAAGCGA CGTGCCGATC GATCTGCTGT TCACGGATGT GGTGATGCCC GGCAAGATCA AAAGCGTGGA ACTCGCGCAG CGAGCCGCGA CTCGCTCGCC CGCGGTGCCG ACGCTCTTCA CTTCCGGCTA TGCGCGCGAT GAAATCGTCC ACCACGGCAA ACTCGACGCC GGTATTACGT TGCTCTCGAA ACCCTACCGG CGCGACGATC TCGCCCGCAA GGTGCGCGGC GTGTTGCGCG CCGGTGCGGC CGCGGCGGCC GGCATGGCGC TGCCCGCGTC CGTGGCCGAA GGACAGATCG CCGCCTGCGT GCCGCCCGCC GCTTACGACC GCGTCGGGGA ATCCAGTCAG GAAAGCCGGC CGCCCGAGGT CGAGGCCATT CCGCAAACAA AGTCTTCTTT GGCGAGGGCG CGCTCGCCCG GCACGCCGGC TCGTGTGCTG CTGGTCGAAG ACGACATGAA CTCACGCGAA GCATTCAACG ACCTGCTGAA CGCGCTGGGA CTCGATTGCA CTGCGGTTGG AAGCGCGGAA GAAGCGCTGC CGCTCGTACC CGCGCAACAC TTCGACATCC TCTTCACCGA TCTCACATTG CCCGGCATGT CCGGCGACTG CCTCGCGCGC GCCATGTTGC GGCAGCAGCC GGGCATTCGC GTGTTGCTGG TGTCGGGCTA CGGCAAGAGT GCGCAGATCG GCGACGCGAT TCCAGGCGCG CGGCTGCTCG GCAAACCGCT CGATATCGCG GAACTGCGGC GCGAACTCGC GGGCTGGATC GATCACACCG AAGAAGCATC CTAA
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Protein sequence | MPFPAHDHGC SGWRGEMAQR ISAFDWAATG LGAIENWPRS LTATVQLLLA SPVPLVLLWG KPGYMIYNDA YAVFAGGRHP YLLGCPVEHG WPEVADFNRH VMATCLAGGT LSYRDKELVL LRDGKPEDVW MDLYYSPVAD DSGAPAGVLA VVVETTTRVL TERWRQRAEA ELHETNERLQ LALNTGTVLG TWVLDVRTGK VSGDERFART FSFRQEEAAK GVERHAAVHM IHPDDQALND QLTAEAIRTR QPFRAEFRIR RPDGDYIWVQ ANGQCEFDEH GEPTRFPGVL IDIHERKIAE QSLRQLTETL EQRVADALAA RALAEEQLRQ AQKMEAIGSL TGGVAHDFNN VLQVINGNLQ MLAADAGGHP ATLRRLSAAT DAVKRGAKLA AHLLAFARRQ PLSPTVLNPR RLLSGMSEML HRALGETVRI DTVLNDDLWN VQADRNQLEN ALLNLAINAR DAMQGDGTLT VRAANRVLDT TFCQDKPELS PGEYVVFSVA DSGAGMPPEI LQRVFEPFFT TKPDGHGTGL GLSMVFGFLR QSGGHTLIES EVGRGTTVSL FFPRCCEAET SEAVDDTEAP SGGGETILVV EDDADVRLTA VEMLAQLGYK VLTASSGDAA IEFIESDVPI DLLFTDVVMP GKIKSVELAQ RAATRSPAVP TLFTSGYARD EIVHHGKLDA GITLLSKPYR RDDLARKVRG VLRAGAAAAA GMALPASVAE GQIAACVPPA AYDRVGESSQ ESRPPEVEAI PQTKSSLARA RSPGTPARVL LVEDDMNSRE AFNDLLNALG LDCTAVGSAE EALPLVPAQH FDILFTDLTL PGMSGDCLAR AMLRQQPGIR VLLVSGYGKS AQIGDAIPGA RLLGKPLDIA ELRRELAGWI DHTEEAS
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