| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5826 |
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| Symbol | |
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| ID | 6278246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2029519 |
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| End bp | 2030976 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616890 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_001889533 |
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| Protein GI | 187920501 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.26319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.439131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATCG AACATCTGAT CAACGGCAAA GCGAGCGCGG CGAAAGACTA CTTCGAAACA
GTCAATCCGG CCACGCAAGA AGTCCTCGCC GAAGTCGCGC GCGGCGGTGC GGAAGAAGTC
GACGCCGCCG TGCGCGCCGC CAAAGACGCC TTTCCCGCGT GGGCCGCCAA GCCCGCCGCG
GAACGCGCGA AGCTGGTGCG CAAGCTCGGC GAACTGATCG CGAAGAACGT GCCCGATATC
TCCGAGACCG AAACGAAAGA CACCGGCCAG ACGATCTCGC AAACGCGCAA GCAACTCGTG
CCGCGCGCCG CCGACAACTT CAGCTACTTC GCCGAGATGT GCACGCGCGT CGACGGCCAT
ACGTATCCGA CCGATACGCA TCTGAACTAC ACGCTGTTCC ATCCGGTCGG CGTGTGCGCG
CTGATCTCGC CATGGAACGT GCCGTTCATG ACGGCCACCT GGAAAGTCGC GCCCTGTCTC
GCGTTCGGCA ATACCGCTGT CCTGAAGATG AGCGAGCTCT CGCCGCTCAC CGCCTCGATG
CTCGGCAACC TCGCGCTCGA AGCCGGCATC CCGGCCGGCG TGCTGAACGT GGTGCACGGT
TTCGGCAAGG ACACCGGCGA GCCGCTGGTC GCGCATCCGG ACGTGCATGC CGTATCGTTC
ACGGGCTCGA CCGCAACCGG CAACCGCATC GTGCAAACCG CGGGATTGAA GAAGTTTTCG
ATGGAACTCG GCGGCAAGTC GCCCTTCGTG ATTTTCGACG ACGCCGATTT CGAACGCGCA
CTCGACGCCG CCGTATTCAT GATCTTCTCG AACAACGGCG AACGCTGCAC GGCGGGCTCG
CGCATTCTCG TGCAGCGCTC TATTTACGCA CGCTTTGCCG AACGTTTCAT TGAGCGCGCA
AAGCGTTTGA CAGTGGGCGA TCCGCTGGCC GACAGCACCA TTGTCGGCCC CATGATCAGT
CAGGGCCATC TGGCGAAGGT GCGCAGCTAT ATCGAACTCG GCCCGAAAGA AGGAGCGACG
CTCGCGTGCG GCGGCCTCGA CATGCCGGAG TTGCCCGACG CCATGCGCAA AGGCAACTTC
GTTCAACCAA CTGTATTCGT CGATGTGGAC AACCGCATGC GCATCGCGCA GGAAGAGATC
TTCGGCCCGG TCGCCTGCCT GATTCCCTTC GACGACGAAG CCGACGCGAT CAAACTCGCC
AACGACATCT CTTACGGACT GTCGAGCTAT ATCTGGACCG AGAACACGGG TCGTGCGTTA
CGTGTCGCCG CCGCCGTCGA AGCCGGCATG TGCTTCGTCA ACAGCCAGAA CGTGCGCGAC
TTGCGCCAGC CGTTCGGCGG CACCAAGGCA TCGGGCGTGG GCCGCGAAGG CGGCACGTGG
AGCTATGAAG TGTTTCTCGA ACCGAAGAAT GTTTGCGTGT CGCTGGGCTC GCATCACATT
CCGCGCTGGG GCGCTTGA
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| Protein sequence | MRIEHLINGK ASAAKDYFET VNPATQEVLA EVARGGAEEV DAAVRAAKDA FPAWAAKPAA
ERAKLVRKLG ELIAKNVPDI SETETKDTGQ TISQTRKQLV PRAADNFSYF AEMCTRVDGH
TYPTDTHLNY TLFHPVGVCA LISPWNVPFM TATWKVAPCL AFGNTAVLKM SELSPLTASM
LGNLALEAGI PAGVLNVVHG FGKDTGEPLV AHPDVHAVSF TGSTATGNRI VQTAGLKKFS
MELGGKSPFV IFDDADFERA LDAAVFMIFS NNGERCTAGS RILVQRSIYA RFAERFIERA
KRLTVGDPLA DSTIVGPMIS QGHLAKVRSY IELGPKEGAT LACGGLDMPE LPDAMRKGNF
VQPTVFVDVD NRMRIAQEEI FGPVACLIPF DDEADAIKLA NDISYGLSSY IWTENTGRAL
RVAAAVEAGM CFVNSQNVRD LRQPFGGTKA SGVGREGGTW SYEVFLEPKN VCVSLGSHHI
PRWGA
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