| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5825 |
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| Symbol | |
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| ID | 6279176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2028736 |
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| End bp | 2029494 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616889 |
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| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit |
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| Protein accession | YP_001889532 |
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| Protein GI | 187920500 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.191601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.369373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCG GCCGCGTTGC ATATGCAGGC GCGATTCACG AAGCCTATCC CGACGCCAAT
GGCGTGCGTC TCGCCGATGG CCGCGTGCGT CGCGAGGACG AAGTCGTGTG GCTGGCGCCA
ATCGAAGTCG GCACGATCTT CGCGCTCGGC CTGAACTACG CCGAGCATGC GAAGGAATTG
CAGTTCAACA AGCAGGAAGA GCCGCTCGTG TTTCTCAAGG GACCGGGCAC GGTGATCGGT
CATCGCGGCG TGACGCGCCG CCCCGCCGAC GTCACCTTCA TGCACTACGA GTGCGAACTG
GCGGTGGTGA TCGGGCAAAC CGCGAAGAAC GTGAAACGCG ACAACGCCAT GCAGCATGTG
GCGGGCTACA TGATCGCCAA CGACTACGCG ATCCGCGACT ACCTGGAAAA CTATTACCGC
CCCAACCTGC GCGTGAAGAA TCGCGACGGC GGCACAGTGC TCGGCCCCTG GTTCGTCGAC
GCCGCCGACG TCGAAGACGT GACGCAACTC GAATTACGCA CGTTCGTGAA CGGCACGCGT
CAGCAACACG GCAACACGCG CGATCTCGTC ACCGGCATCC CGGCGCTGAT CGAATACCTG
AGCAGCTTCA TGACCCTCGC GCCCGGCGAC GTGATCCTGA CCGGCACGCC GGAAGGCATC
GTCAACGTCA ATGCGGGCGA CGAAGTGGTC TGCGAAATCG ACGGCCTGGG CCGTCTCGTC
AATACGATTG CGTGTGACGC GGACTTCAAC CGCGCCTGA
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| Protein sequence | MMRGRVAYAG AIHEAYPDAN GVRLADGRVR REDEVVWLAP IEVGTIFALG LNYAEHAKEL
QFNKQEEPLV FLKGPGTVIG HRGVTRRPAD VTFMHYECEL AVVIGQTAKN VKRDNAMQHV
AGYMIANDYA IRDYLENYYR PNLRVKNRDG GTVLGPWFVD AADVEDVTQL ELRTFVNGTR
QQHGNTRDLV TGIPALIEYL SSFMTLAPGD VILTGTPEGI VNVNAGDEVV CEIDGLGRLV
NTIACDADFN RA
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