Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5823 |
Symbol | |
ID | 6277649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2027378 |
End bp | 2027830 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642616887 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001889530 |
Protein GI | 187920498 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.186038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.534085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTT CCGCCTCGAC CCGAGTTTTG CATCGCAACC TGCCCATGCT GTTGCTGCGC GCCAGAGAAA AAATGATGGA GCGGTTTCGT CCGCTGATTA CCGCGCATGG ATTGACCGAA CAGCAGTGGC GCGTGATTCG CGCGCTCAAT GAGCACGGCC CGATGGAACC GCGCCATATC TCCGATATCT GCACGATTTC GAGCCCGAGC ATGGCCGGCG TGCTCGCGCG CATGGAGAGC ATGGAACTGG TGACCAAAGA GCGTTTCGCC GAAGACCAGC GGCGTGTGCT GGTGTCGCTC ACGGACACGA GCGCGGAATT AGTGCGCGTG ATTTCAAAGG ATCTCGAAGC GCATTACCGC GAGCTGGAGC GCAAGGTGGG ACCGGAGATC GTCGAGCGCG TGTATCGCGC GGTGGACGAT CTCCTGGCGG GTCTGGAGGA AGAGGAGGAG TGA
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Protein sequence | MSASASTRVL HRNLPMLLLR AREKMMERFR PLITAHGLTE QQWRVIRALN EHGPMEPRHI SDICTISSPS MAGVLARMES MELVTKERFA EDQRRVLVSL TDTSAELVRV ISKDLEAHYR ELERKVGPEI VERVYRAVDD LLAGLEEEEE
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