| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5801 |
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| Symbol | |
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| ID | 6277329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2005346 |
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| End bp | 2006581 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616865 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001889508 |
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| Protein GI | 187920476 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00555584 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.58755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACTT TTGACGTGAC CAAGGCCGCC GTCGTCGCGA CAACGGCATT CGCGGCCGCA
GCGCCGGCGT TCGCACAAAG CAGCGTCACG CTGTACGGCA TCGTCGATGA TTCGATCGTT
TATCAAAGCA GCCAGACCTC GCTCGGTTCG ACGAACGGTG GTCGTTCGAA CGTCAAGATG
GCATCGGGCA TCTGGGCGGG TAGCCGCTTC GGCCTGAAGG GCGCAGAAGA TTTGGGTGGC
GGCACCAAGG CCATCTTCCA GTTGGAGTCG GGCTTCAACC TCAACAACGG CGCGCAGCAG
TACGCCAACG CGATGTTCGG CCGTCAAGCC TGGATCGGTC TGACGAACGA GACCTTCGGT
ACGCTGACAT TGGGTCGCCA GTACACGTCT TACTACACAC TGATGGCACC GTACAGTCCG
ACCAACTGGC TCACGGGCTA CTTCGGCGCG CACCCGGGCG ATGTGGACGC TTTGGACACG
ATCTACCGCG CAAACAACTC GATCGTCTAT ACGTCGCCGA AGCTCTACGG CGTGACGGTG
AGCGGCTCGT ACTCGCTCGC AGGCGTGCCG GACAGCGTCT ATCGCGGCTC AACGTGGTCG
GCGGCAATCC AGTATCAGCA GGGCCCGATC GGCGGTACGG TTGCGTTCTC GCGCATCAAC
AACTCAACCG TCGGCGGCGG CGTCTACGGT GCGGATTCGA CAATGAACAC GGCTGGCCAG
TCGGGCGTGT CGGCAGTGAC GAACGGCTAT CAGGGTGCGC AGGCGCAGAA TCGCTTCGCG
GTCGGCCTCG GCTACGTATT CAATAGCGCC TGGGATCTCT CGGCGACGTA CACCAACGTT
CAGTACATCC CGGGCGTGCT GTCGAAGTTC ACCGACGAGC AGGTTTTCAA CACCGCCGGC
ACCGTGCTGC ACTGGAAGCC CGTGACGGCA TGGGACTTCG CTGCCGGCTA TAGCTATACG
TGGGCGAGCA AGGCGAACGG TGTCGACGAC GCAGCGTCGT ACCACCAGTT CAGTCTGTCC
CAGTACTACG CGCTGTCCAA GCGCACCGGC TTCTACGCAC TGGAAGCATT CCAGCGCGCG
AACGGCCGGA CGCTCGGCAC GCCGACGTTT ACGACGGCAG GCGCGACGAA CCGGCAGATC
GATGCAACGG CATCCATCGG CGATGGCTTC CAGTCGGCTC CGTCGTCGTC GCGTAGCATG
TTTGCAGCAG GCGTGGGTAT CGTCCACCGC TTCTAG
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| Protein sequence | MRTFDVTKAA VVATTAFAAA APAFAQSSVT LYGIVDDSIV YQSSQTSLGS TNGGRSNVKM
ASGIWAGSRF GLKGAEDLGG GTKAIFQLES GFNLNNGAQQ YANAMFGRQA WIGLTNETFG
TLTLGRQYTS YYTLMAPYSP TNWLTGYFGA HPGDVDALDT IYRANNSIVY TSPKLYGVTV
SGSYSLAGVP DSVYRGSTWS AAIQYQQGPI GGTVAFSRIN NSTVGGGVYG ADSTMNTAGQ
SGVSAVTNGY QGAQAQNRFA VGLGYVFNSA WDLSATYTNV QYIPGVLSKF TDEQVFNTAG
TVLHWKPVTA WDFAAGYSYT WASKANGVDD AASYHQFSLS QYYALSKRTG FYALEAFQRA
NGRTLGTPTF TTAGATNRQI DATASIGDGF QSAPSSSRSM FAAGVGIVHR F
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