| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5798 |
|---|
| Symbol | |
|---|
| ID | 6277865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2002340 |
|---|
| End bp | 2003149 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642616862 |
|---|
| Product | hydratase/decarboxylase family protein |
|---|
| Protein accession | YP_001889505 |
|---|
| Protein GI | 187920473 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000214426 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.683371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC CAGCTGCAAC ACAGGCCGCC AAGGCTATCG CCAGTCCGCG CGCAGAGGCA
GCACGCATTC TTGTGACAGC GCGCCAAAAA AGCGAGCTCG TCGAGCGGCT ACCTGTCGAA
CTGTTGCCTG CGGATGTGGA CGACGGTTTT GCCATCCAGC AAGAGGTCAG CTACCAGCTG
GGTCAGAGGA TCGGCGCATG GAAATGCGCG CTTCCTCAGC CGGGCAAAGT CATTGCCGCG
CCGATCTATG ACGCTGATAT CCGTCGAGGT GACGTTTGTC GCACGACGGG GCCTTCGCGT
GCCTTTATGA GGGCAGAGCC CGAACTGGCC TGTCTGCTGA ACCGCGACCT GCCCCCACGA
CGCGAAGCCT ATAGCGAAGC CGAAGTGCTC GACGCTCTTG GGCACACGCA CCTCGCGCTT
GAATTGCTAG GCAGTCGGTA TTCGCACCCC GAAACGCTGA CGTTCCCTGA ATTATTGGCA
GACGGCCTGT TCAATGCGGG CCTTGTCATT GGACCCCGCG TTAATTCGAT CGAAGGCGCG
ACGCTGGCCG ATCTCCCCGT CGAATTGGAC ATCAGTCTGG CCAGTGTCGG GGCAGAAGCA
GTCACGTTCG CTGGCCGCCA TCCTGATCGC AGCTTGCTGG CGCCGATCGT GTGGCTCAGC
AATTTCCTTC GTGTCCGCGG CCTCGGACTG CTTGCGGGCC AGGCTGTTAT CACCGGCTCT
TACGCCGGTG TGCTGCAATT GCCAATCGGC TGTGAACTGC GTGTTGGCTT CGGCAACCTC
GGCACATTTC CGATTACTTT TTTGTCCTGA
|
|---|
| Protein sequence | MNAPAATQAA KAIASPRAEA ARILVTARQK SELVERLPVE LLPADVDDGF AIQQEVSYQL
GQRIGAWKCA LPQPGKVIAA PIYDADIRRG DVCRTTGPSR AFMRAEPELA CLLNRDLPPR
REAYSEAEVL DALGHTHLAL ELLGSRYSHP ETLTFPELLA DGLFNAGLVI GPRVNSIEGA
TLADLPVELD ISLASVGAEA VTFAGRHPDR SLLAPIVWLS NFLRVRGLGL LAGQAVITGS
YAGVLQLPIG CELRVGFGNL GTFPITFLS
|
|---|
| |