Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5798 |
Symbol | |
ID | 6277865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2002340 |
End bp | 2003149 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642616862 |
Product | hydratase/decarboxylase family protein |
Protein accession | YP_001889505 |
Protein GI | 187920473 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000214426 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.683371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC CAGCTGCAAC ACAGGCCGCC AAGGCTATCG CCAGTCCGCG CGCAGAGGCA GCACGCATTC TTGTGACAGC GCGCCAAAAA AGCGAGCTCG TCGAGCGGCT ACCTGTCGAA CTGTTGCCTG CGGATGTGGA CGACGGTTTT GCCATCCAGC AAGAGGTCAG CTACCAGCTG GGTCAGAGGA TCGGCGCATG GAAATGCGCG CTTCCTCAGC CGGGCAAAGT CATTGCCGCG CCGATCTATG ACGCTGATAT CCGTCGAGGT GACGTTTGTC GCACGACGGG GCCTTCGCGT GCCTTTATGA GGGCAGAGCC CGAACTGGCC TGTCTGCTGA ACCGCGACCT GCCCCCACGA CGCGAAGCCT ATAGCGAAGC CGAAGTGCTC GACGCTCTTG GGCACACGCA CCTCGCGCTT GAATTGCTAG GCAGTCGGTA TTCGCACCCC GAAACGCTGA CGTTCCCTGA ATTATTGGCA GACGGCCTGT TCAATGCGGG CCTTGTCATT GGACCCCGCG TTAATTCGAT CGAAGGCGCG ACGCTGGCCG ATCTCCCCGT CGAATTGGAC ATCAGTCTGG CCAGTGTCGG GGCAGAAGCA GTCACGTTCG CTGGCCGCCA TCCTGATCGC AGCTTGCTGG CGCCGATCGT GTGGCTCAGC AATTTCCTTC GTGTCCGCGG CCTCGGACTG CTTGCGGGCC AGGCTGTTAT CACCGGCTCT TACGCCGGTG TGCTGCAATT GCCAATCGGC TGTGAACTGC GTGTTGGCTT CGGCAACCTC GGCACATTTC CGATTACTTT TTTGTCCTGA
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Protein sequence | MNAPAATQAA KAIASPRAEA ARILVTARQK SELVERLPVE LLPADVDDGF AIQQEVSYQL GQRIGAWKCA LPQPGKVIAA PIYDADIRRG DVCRTTGPSR AFMRAEPELA CLLNRDLPPR REAYSEAEVL DALGHTHLAL ELLGSRYSHP ETLTFPELLA DGLFNAGLVI GPRVNSIEGA TLADLPVELD ISLASVGAEA VTFAGRHPDR SLLAPIVWLS NFLRVRGLGL LAGQAVITGS YAGVLQLPIG CELRVGFGNL GTFPITFLS
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