| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5797 |
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| Symbol | |
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| ID | 6277411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2001436 |
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| End bp | 2002326 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642616861 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001889504 |
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| Protein GI | 187920472 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000115935 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.674936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTCG TCCGTTTCGG CCTGCCTGGC CAGGAGCACC CCGGTATCAT CGATTCGAGC
GGCGCGATCC GCGATCTGAG CGGCATCGTG AGCGACATCG ATGGAACGAC TGTCTCGCCG
GTCGCCCTTG CAAAGCTGGG CGAACTCGAT TTAGATCGTC TACCCCTCGT TGAGGCGGGC
ACGCGTCTCG GCGCCTGCGT CGGCAACGTC CGTAATCTAG TGTGCATTGG TCTGAACTAC
TCCGATCATG CTGCTGAAAC CGACACGCCG ATACCACGCG AACCTGTGGT GTTCAACAAG
CATACGGGCT CGATTAGCGG TCCGAACGAC CCGGTCATCT TGCCCGCAGA TGCGCAAAAG
CTGGATTGGG AGGTCGAACT CGGCGTGGTG ATCGGTAAAC CCGCCTGGCA GATCGACGAA
GCAGACGCGC TAGAACATGT GGCGGGCTAC TGCCTTGCGA ATGATGTTTC CGAACGCGCG
TATCAGCTCG AACGCGAAGG CCAGTGGACC AAGGGTAAAA GCGGATTCTC GTTCGCTCCG
CTTGGACCGT GGCTTGTCAC GCGTGATGAA ATTCCCGACC CGCAGGTTCT GGACCTGTGG
CTCGACGTCA ACGGCACGCG TCGTCAGACC GGCAACACAC GGACCATGAT CTTCAATATT
GCGCATATCG TGGCGTATCT CAGCCGCTTC ATGCCTTTGA TGGCGGGCGA CGTGATTATT
ACGGGCACGC CTCCTGGCGT AGGCCTCGGT CAGAAACCGC CAGTTTTCCT TAAAGCAGGC
GACACGATGA CGCTCGGGGG CAGCGGACTC GGCGAGCAGT CACAAAAGGT TGTGCAGTAC
GTAGATACAC TCGGCGCGGC CTGGGGCCGT GGCGAGTATC CCTCGGCATA A
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| Protein sequence | MRLVRFGLPG QEHPGIIDSS GAIRDLSGIV SDIDGTTVSP VALAKLGELD LDRLPLVEAG
TRLGACVGNV RNLVCIGLNY SDHAAETDTP IPREPVVFNK HTGSISGPND PVILPADAQK
LDWEVELGVV IGKPAWQIDE ADALEHVAGY CLANDVSERA YQLEREGQWT KGKSGFSFAP
LGPWLVTRDE IPDPQVLDLW LDVNGTRRQT GNTRTMIFNI AHIVAYLSRF MPLMAGDVII
TGTPPGVGLG QKPPVFLKAG DTMTLGGSGL GEQSQKVVQY VDTLGAAWGR GEYPSA
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