Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5779 |
Symbol | |
ID | 6279755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1982808 |
End bp | 1983674 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642616846 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001889489 |
Protein GI | 187920457 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGATC AGACAAATTT GGCGGCTATT CTCGGGAAAG ACGAGACGAG CATTCTTAAG GTCTGGGTCA ATGAGCAATT GACCGGCAGC GCCAGGCAGG GCGTGATTAC GGAAGGCGAA TTAAAGGAGA CGTCGCGAGT ATTTCTCTCG CTGTTTGCTC GCGCCGTTAA AAGCGACTAC GACGAAGCAA TGAGCAGCGA AGTGTGGGAG CCCATCAAGG CGCACCTCGC TGCTTTGTCG CGCGAGCGTG TCATTCAGGG TTTCTCGCCC GCGGAAACCG CTACCTTCGT GTTCTCGCTC AAGAAGCCGT TGTTCGACGC GCTGCGTAAA GAACTCGGTA AGGACGCGGC GGGTCTTGCC AATGAAGTGT GGAAGCTGAC AGTCGTGCTC GACAAACTGG GGTTGCTGAC TGTCGAGTCG TATCAGCAAA CGCGCCAGGA AATCATCGAG CGTCAACAGC AGGAACTTCT CGATCTCACC ACGCCCGTGG TAAGGCTTTG GGATTCGATC GTGGCGCTGC CATTGATCGG CACACTCGAC AGCGAGCGCA CGCAGGTCGT GATGGAAAGC CTGCTCGATT CGATCGTGGA GAACGAAGCC GCCATTGCCA TTATCGACAT TACCGGTGTG CCTACCGTCG ACACGCTCGT CGCGCAGCAT CTGTTGAAGA CCGTTGCTGC TGCGCGTCTG ATGGGTGCCG AATGCATTAT CAGCGGTATT CGTCCGCAGA TTGCACAGAC CATCGTTCAC CTCGGTGTCG ATCTTGGCGA CGTGGTCACA AAAGCCACTT TGGCAGAGGC ACTCAAGGTC GCGTTGCGGC GCGTCGGCAT GACAGTGGCC GCGATCACGG CGAAGCAGGA TAACTGA
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Protein sequence | MSDQTNLAAI LGKDETSILK VWVNEQLTGS ARQGVITEGE LKETSRVFLS LFARAVKSDY DEAMSSEVWE PIKAHLAALS RERVIQGFSP AETATFVFSL KKPLFDALRK ELGKDAAGLA NEVWKLTVVL DKLGLLTVES YQQTRQEIIE RQQQELLDLT TPVVRLWDSI VALPLIGTLD SERTQVVMES LLDSIVENEA AIAIIDITGV PTVDTLVAQH LLKTVAAARL MGAECIISGI RPQIAQTIVH LGVDLGDVVT KATLAEALKV ALRRVGMTVA AITAKQDN
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