Gene Bphyt_5779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5779 
Symbol 
ID6279755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1982808 
End bp1983674 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content57% 
IMG OID642616846 
Productanti-sigma-factor antagonist 
Protein accessionYP_001889489 
Protein GI187920457 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGATC AGACAAATTT GGCGGCTATT CTCGGGAAAG ACGAGACGAG CATTCTTAAG 
GTCTGGGTCA ATGAGCAATT GACCGGCAGC GCCAGGCAGG GCGTGATTAC GGAAGGCGAA
TTAAAGGAGA CGTCGCGAGT ATTTCTCTCG CTGTTTGCTC GCGCCGTTAA AAGCGACTAC
GACGAAGCAA TGAGCAGCGA AGTGTGGGAG CCCATCAAGG CGCACCTCGC TGCTTTGTCG
CGCGAGCGTG TCATTCAGGG TTTCTCGCCC GCGGAAACCG CTACCTTCGT GTTCTCGCTC
AAGAAGCCGT TGTTCGACGC GCTGCGTAAA GAACTCGGTA AGGACGCGGC GGGTCTTGCC
AATGAAGTGT GGAAGCTGAC AGTCGTGCTC GACAAACTGG GGTTGCTGAC TGTCGAGTCG
TATCAGCAAA CGCGCCAGGA AATCATCGAG CGTCAACAGC AGGAACTTCT CGATCTCACC
ACGCCCGTGG TAAGGCTTTG GGATTCGATC GTGGCGCTGC CATTGATCGG CACACTCGAC
AGCGAGCGCA CGCAGGTCGT GATGGAAAGC CTGCTCGATT CGATCGTGGA GAACGAAGCC
GCCATTGCCA TTATCGACAT TACCGGTGTG CCTACCGTCG ACACGCTCGT CGCGCAGCAT
CTGTTGAAGA CCGTTGCTGC TGCGCGTCTG ATGGGTGCCG AATGCATTAT CAGCGGTATT
CGTCCGCAGA TTGCACAGAC CATCGTTCAC CTCGGTGTCG ATCTTGGCGA CGTGGTCACA
AAAGCCACTT TGGCAGAGGC ACTCAAGGTC GCGTTGCGGC GCGTCGGCAT GACAGTGGCC
GCGATCACGG CGAAGCAGGA TAACTGA
 
Protein sequence
MSDQTNLAAI LGKDETSILK VWVNEQLTGS ARQGVITEGE LKETSRVFLS LFARAVKSDY 
DEAMSSEVWE PIKAHLAALS RERVIQGFSP AETATFVFSL KKPLFDALRK ELGKDAAGLA
NEVWKLTVVL DKLGLLTVES YQQTRQEIIE RQQQELLDLT TPVVRLWDSI VALPLIGTLD
SERTQVVMES LLDSIVENEA AIAIIDITGV PTVDTLVAQH LLKTVAAARL MGAECIISGI
RPQIAQTIVH LGVDLGDVVT KATLAEALKV ALRRVGMTVA AITAKQDN