Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5773 |
Symbol | |
ID | 6279344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1977819 |
End bp | 1978610 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642616841 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001889484 |
Protein GI | 187920452 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.501857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACC GAAAGGCACC TAAAAAGCAA TCACGCGGAA CAGTGTCGAA CCGGTCACTC GAACGTGGTC TTGAGATACT CAGCGCGTTC GGCCCGGGTG CCGCCTTGCT CGGCAACGGG GACCTCGTCG AACGCACAGG TCTGGCCAAA GCGACGGTGA GTCGCCTCAC CCGCACGCTC GCTGAGGCTG GTTATCTCGA ACATGACGTG GGCCGTAAGG CATATCGGCT TGGTGTTCCC GTGTTGAGCG TCGCGCAAGC GATGCGTAGC GGCTCGACAA TCCTTCTTGC CGCCGGCCCG TTGATGCGCG CTGCTGCCCA GGAGCGTCGC ATCAACGTAG GGCTCGCTGC CGCGGACCGT GAAGACATGG TCTATCTGGA ATCTATCCGT TACAACCAAC GCGCGTCGTT GCGAACGATC GTGTCTGGAC AACGTATTCC GATGGACCTG ACTGCACTCG GGCGCGCCCA TCTGTCGACG CTTTCGAAAG AAGAGTTCGT CAGGATGATG GCCAGGTTTG AGAAGCGGGA GCGTGGTCAA TGGGCACGCG TCCACGCCGA AATCCGGGAC GCAGTGGACA GCGTCCACGC CAATGGATAC TGCGGAGCAA GCTGGCAGCC AGAGGTGGTG GCTATCGCGG CACCTTTGGC AATCCCCGGT CATCGCACGG TCGTCGTCAA TTTCAGCGTG CGTTCCGTGG AGCCCATGCA GACCATTGTC ACTGAGCTCT CCAAGCCTCT GCTTGAATTG CGCGATCAGA TCCTGGCCGA AGTCGCCAGG ATAGAAAGCT GA
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Protein sequence | MPDRKAPKKQ SRGTVSNRSL ERGLEILSAF GPGAALLGNG DLVERTGLAK ATVSRLTRTL AEAGYLEHDV GRKAYRLGVP VLSVAQAMRS GSTILLAAGP LMRAAAQERR INVGLAAADR EDMVYLESIR YNQRASLRTI VSGQRIPMDL TALGRAHLST LSKEEFVRMM ARFEKRERGQ WARVHAEIRD AVDSVHANGY CGASWQPEVV AIAAPLAIPG HRTVVVNFSV RSVEPMQTIV TELSKPLLEL RDQILAEVAR IES
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