| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5760 |
|---|
| Symbol | |
|---|
| ID | 6277430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1965934 |
|---|
| End bp | 1966380 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642616830 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_001889473 |
|---|
| Protein GI | 187920441 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.740827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA CATCTAAAGA AGACGTTCGG TCCCATTGCG CAGTGAACTA CGGCGTGGAG
ATCTTCGGCG ACCGGTGGTC GCTTCTGATC ATTCGCGACA TCGTTTTTGT CGGCAAAAAG
ACGTATGGCG AGTTCCTGAA ATCGGAAGAG GGCATCGCGA CCAATGTCCT TGCTTCCCGC
CTTGCCTTTC TTGAGGAGCA GGGAATTCTC TCGAAGGCCC CCAATCCCGG CGACAAGCGC
AAGGACTTCT ACACTCTGAC CGAGAAGGGC CTGGACCTCA TTCCCATCGT GCTTAACATA
GTCCTTTGGA GTGCAAAGTA CGATTCGAAG TCCTACGTGC GGCGCAGCAA GGAGTTTTTT
GCCCGATTGA GTCGAAGCCC AATGCAGGTG AGTGAAGAGG TGAAGGCGCT GGTTCGCAAC
GGCGAATGCA TCTTTCCTGA GAGTTAG
|
|---|
| Protein sequence | MKTTSKEDVR SHCAVNYGVE IFGDRWSLLI IRDIVFVGKK TYGEFLKSEE GIATNVLASR
LAFLEEQGIL SKAPNPGDKR KDFYTLTEKG LDLIPIVLNI VLWSAKYDSK SYVRRSKEFF
ARLSRSPMQV SEEVKALVRN GECIFPES
|
|---|
| |