| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5736 |
|---|
| Symbol | |
|---|
| ID | 6277405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1937185 |
|---|
| End bp | 1938786 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642616806 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_001889449 |
|---|
| Protein GI | 187920417 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.437114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGCAA CCATTTTCGG CCACAACTAC ATTGGCGGCC AGCGCAGCGC GTGTGGCGAT
ATCTCGCTGC ACAGCCTCTC GGCATCGACC AGCGAAGTGT ATCCGGTGGC TTTTTCCCAG
GCGACCGATG CTGAAGTCGA CGCGGCCGTG GAGGCCGCGG CGGCAGCATT TCCACTCTAT
CGGGCGCTGC CCTCAAGCGT ACGCGCCGAT TTCCTCGAGG CAATTGCAGC GGAGATCGAT
GCTCTCGGTG ACGATTTCAT CGCCGACGTG ATGCGCGAAA CCGCGTTGCC GAATGCGCGT
ATCGCCGGCG AGCGGGCGCG CACCAGCAAC CAGATGCGAC TCTTCGCGAA GGTCTTGCGC
CGGGGTGATT TCTACGGTGC GCGCATCGAT CGGGCGTTGC CTGAGCGGCA ACCATTGCCG
CGTCCGGATC TGCGGCAATA CCGGATCGGC GTCGGCCCGG TCGCGGTGTT CGGCGCGAGC
AATTTTCCGT TGGCGTTCTC CGTTGCCGGC GGCGATACTG CGTCCGCGCT GGCAGCCGGC
TGCCCGGTTG TGGTCAAGGC GCACTCCGGC CATCTGGTGA CGTCGGAGCG CATGGCGGAT
GCGATCGAGC GCGCGATTCG ACGCACAGGC ATGCCGGCAG GGACCTTCAA CATGATCTAT
GGCGAGCGCG TCGGTGCGCG CCTCGTGCAG GCGCCTGGCA TTCAGGCGGT TGGCTTCACC
GGTTCACTGA GCGGCGGCCG GGCGCTATGC GATCTTGCGG CAGCGCGTGA ACAACCGATT
CCGGTGTTCG CGGAGATGTC GAGCGTGAAT CCGGTCTTCG TGCTGGAGGG CGCCTTGCAG
GAGCGCGGCG CGGCGCTGGC CAACGAGCTC GCGGCCTCGG TCGCAACGGG TTGCGGCCAG
CTGTGCACCA GCCCCGGCCT CGTGCTCGGC GTGCGTTCGC CGCGCTTCGG CGCATTCATC
GACAGCCTCG GCAAGGCGAT CGAGCGGCAG CCGCCGCAGA CCATGTTGAA TACGGGCATC
TTCGCCAACT TCCGGGCAGG CCTCGAACGA GCGTCGAATC ACGCAGGCAT CGCCTTAAGC
GCAGCCGCGC AAGGTGAAAC CGAGCAAGCC GCCGCACAGC TGTTCGTCGC CGATGCCGCG
TTGCTGTTCG ATCCGGGCCG GCCGCTCGAA GAAGAAATCT TCGGACCGGC CACGGTCGTG
GTCGAACTCG ATAGCGCGGA ACACCTGTTG CGTTTCGCGT CCGCGATGCG CGGCCAGTTG
ACGGCCACGC TGCTCGCGTC GCACGGCGAT CTGCGGTCGC ACCGCAAGCT GATCGAACGG
CTCGAGGAAA AGGCCGGCCG TCTGCTTGTG AACGGGTATC CGACCGGCGT CGAAGTGTCG
GACGCGATTG TCCATGGTGG CCCGTGGCCC GCCACCTCCG ATGCGCGGGG CACCTCGGTC
GGCACGCTCG CGATCGACCG CTTCCTGCGG CCCGTGTGCT ACCAGAACTA TCCGGACGAG
CTGCTACCCG ACGCGCTGAA GAATGCCAAT CCGCTCAATT TGATGAGGCT CGTCGATGGA
GAGATGACCC AGCGTTCTCT TGATTGTGCA CCTGGTCGCT AA
|
|---|
| Protein sequence | MTATIFGHNY IGGQRSACGD ISLHSLSAST SEVYPVAFSQ ATDAEVDAAV EAAAAAFPLY
RALPSSVRAD FLEAIAAEID ALGDDFIADV MRETALPNAR IAGERARTSN QMRLFAKVLR
RGDFYGARID RALPERQPLP RPDLRQYRIG VGPVAVFGAS NFPLAFSVAG GDTASALAAG
CPVVVKAHSG HLVTSERMAD AIERAIRRTG MPAGTFNMIY GERVGARLVQ APGIQAVGFT
GSLSGGRALC DLAAAREQPI PVFAEMSSVN PVFVLEGALQ ERGAALANEL AASVATGCGQ
LCTSPGLVLG VRSPRFGAFI DSLGKAIERQ PPQTMLNTGI FANFRAGLER ASNHAGIALS
AAAQGETEQA AAQLFVADAA LLFDPGRPLE EEIFGPATVV VELDSAEHLL RFASAMRGQL
TATLLASHGD LRSHRKLIER LEEKAGRLLV NGYPTGVEVS DAIVHGGPWP ATSDARGTSV
GTLAIDRFLR PVCYQNYPDE LLPDALKNAN PLNLMRLVDG EMTQRSLDCA PGR
|
|---|
| |