| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5725 |
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| Symbol | |
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| ID | 6279270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1927829 |
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| End bp | 1928836 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642616795 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001889438 |
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| Protein GI | 187920406 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.31475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCG ATCTTCCCGT TGTCTGGGCG TTCATTATCG GACTTGGCGT CTTTATCTAT
GTGATGCTCG ACGGCTTCGA TCTGGGTATC GGCCTGCTGT TTCCATTCTT TGAAGAAAAG
GGTGATCGTC ACGTCATGCT CAATACCGTC GCCCCCGTTT GGGACGGCAA CGAAACGTTT
CTGGTCCTTG GCGGCGCCGG CCTCTACGGC GCCTTTCCCG TTGTCTATTC GACGCTCCTG
CCGGCCAACT ACATGCCGCT GATCCTGATG GTGGTGGGTC TGATTTTTCG CGGCGCGGCG
TTCGAACTGC GGGCGAAGGC GAAGCGGACG CAGCACGCAT GGGATCTCGC ATTTATCGGC
GGCTCGGCAC TCGCGGCTCT CTGTCAAGGC ATTACGTTAG GCTCGCTGCT ACAGGGCATC
AAGATTGCCG ACTCCCGCTT TGTCGGCGAA CCGTTCGACT GGCTCTCGCC GTTCAGTCTG
TTCTGCGGCA TCGGCGTACT GATGACCTAT GCGACGCTAG GGTGTGGCTG GCTTATCCTC
AAGACGGACG GCGAATTGCA GCGCAAGATG CGAGAGCTGA TGCGGCCACT CGTGATCGCT
CTGCTGGCGA CAATTGGAAT CGTCAGCCTG TGGACCGTGA TCGGACTGCC CGCGGTGGAG
AAGCGCTGGT TTGGCAGCGG GCAACTCGGA TGGTTTCTAC CCGTGCCGAT ACTTGTCGTT
CTCTGCGTCT GGGGCATTCT CCGCTCGGTG CGACTACAAC ACGAAGCAAT GCCATTCCTT
CTCACACTAG GTATCTGTTT TCTCGGTTAC ACCGGTCTCG TCATCAGTAT CTGGCCGTAT
ATCATTCCAC CCTCATTGAC GATCTGGGAT GCTTCGTCGA GTCATTCGAG CCAGCTGTTT
GCACTCGTCG GCACCGTCAT CGTGCTGCCG GTCATTCTCG TCTATAACGC CATGCAATAT
CGTGTATTCC GTGGGAAGGT ACGTGAAGGA GACCCCGGCT ACCATTGA
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| Protein sequence | MQIDLPVVWA FIIGLGVFIY VMLDGFDLGI GLLFPFFEEK GDRHVMLNTV APVWDGNETF
LVLGGAGLYG AFPVVYSTLL PANYMPLILM VVGLIFRGAA FELRAKAKRT QHAWDLAFIG
GSALAALCQG ITLGSLLQGI KIADSRFVGE PFDWLSPFSL FCGIGVLMTY ATLGCGWLIL
KTDGELQRKM RELMRPLVIA LLATIGIVSL WTVIGLPAVE KRWFGSGQLG WFLPVPILVV
LCVWGILRSV RLQHEAMPFL LTLGICFLGY TGLVISIWPY IIPPSLTIWD ASSSHSSQLF
ALVGTVIVLP VILVYNAMQY RVFRGKVREG DPGYH
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