Gene Bphyt_5696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5696 
Symbol 
ID6278560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1900169 
End bp1900879 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID642616769 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001889412 
Protein GI187920381 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.226605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCAA CTTTCACCAA ATGGCTTTTT ATCGTCTACC TCTTCGGTAG CGGCACGCTG 
TATTCGATCA TCATCCTGCT CCTGTTCCCG TTTGTCGGAC GTGCGGGGCG ATACTGGCTC
GCGAGGCAAT GGTGTCGCGC ACTGGTTTTC GTCATGCGTT GGATACCCGG CGTTTCATGT
TCGATAGACG GGCTCGACAA CCTTCCGGAC GGTCCGGCGA TTATCCTGTC ACGTCATGAG
TCGACGTGGG AAACCCTCGC GTTTCTCGCA CTTTTTCCGC GTCGCGTGAG TTTCGTGTTC
AAGGAGGAAC TGCTGCGCAT TCCGTTTTTC GGCTGGGTGT TGCGTGGCCT CGATATGGTC
AGCCTGAACC GCGGCTCCGC TCGACAGGCT CACCAGGCTG TGACGAAGGA AAGCGCGGAG
CGGCTGGCCA AGGGCGATGT CGTCGTCATT TTCCCGGAGG GCACCCGGGT CGCGCACGAC
GCGCCGTTGC GCATGACGTC CGGCGGCGTG CGGCTGGCGT GCGCGACCGG CGTGCCGGCC
GTGCCCGTGG TCCTGAACGC GGGCAAGGTC TGGCCGACCA AAGGCTGGCC GGACGGCCGC
GGACATATTC GCGTGGTGGT CGGGCCGCCG CTGTCTCCGC AAGACATGAC GCAGCAGGAA
TTGAGTCACG CGGTCCACGA GTGGATGAAA AACGAACTGC TGCGGCTTTG A
 
Protein sequence
MRSTFTKWLF IVYLFGSGTL YSIIILLLFP FVGRAGRYWL ARQWCRALVF VMRWIPGVSC 
SIDGLDNLPD GPAIILSRHE STWETLAFLA LFPRRVSFVF KEELLRIPFF GWVLRGLDMV
SLNRGSARQA HQAVTKESAE RLAKGDVVVI FPEGTRVAHD APLRMTSGGV RLACATGVPA
VPVVLNAGKV WPTKGWPDGR GHIRVVVGPP LSPQDMTQQE LSHAVHEWMK NELLRL