Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5695 |
Symbol | |
ID | 6278107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1898913 |
End bp | 1900034 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616768 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001889411 |
Protein GI | 187920380 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.348726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGTC TTGCAATGAC TGCGGCCGCA TTGATGGCCG CTGGTTTCAC CCTGTCCGCG AGTGCCCAGG TCGTAGTCAC CATCGGTCAT TCGGCGCCGC TCACCGGTCC GCAGGCGCCG AACGGCAAGG ACAACGAGAA CGGCGCACGG CTCGCCATCG ACGAGCTGAA CAAGTCGGGC GTCACCGTCG CGGGTCAGAA GGTCACCTTC AAACTGGACT CGGAAGACGA CCAGGCGGAC CCGAAAATCG GGGTGCAAGT CGCGCAGAAA CTGGTCGACA GCGGCGTGGT CGCCGTGGTC GGACCGTATA ACTCGGGCGT GGCGATTCCG GCATCGCGCG TCTACAACAC CGGCAATGTC CCGATGCTGC CGGTCGCATC GAACCCCGCG CTAACGAGGC AGGGCTTCAA GAACATCTTC CGGATCGGCG CGAGCGACGA GCAACTCGGC GGCACGATGG GCCAGTTCGC CGCGAAGACC TTGAAGGCCA AAACGGCCGC CGTTATCGAC GACCGCACGG CGTATGGTCA GGGTGTCGCC GAGCAGTTCG TGAAGGTCGC CAAGGCGAAC GGCATCCAGA TTGTCGAGCA GGAGTTCACC AACTCGTCGG CGACGGATTT CCTCAGCATT CTGACGACCA TCAAGGCCAA GAATCCCGAC GTGATTTTCT TCGGCGGCTA TGCGGCGCAG GGCGCGCCGA TGGCCAAACA GATGCGTCAG CGCGGACTCA GGGCGAAGCT GCTCGGCGGC GACGGCATCT GCTCGGCCGA CATGGGCAAG GTGGCGGGCG AGGCGGCCTC GATCGTCTAT TGCGCGCAGG GCGGCATTGC GCTGGAGAAG ACAGCAGCCG GCCGCGAGTT CCTGCAAAAG TACAAGGCGG CCTACAACAT CGATACGCAG GTCTACGCCG TGAGTTACTA CGACGGCGTC AAGTTGCTGG CCGACGCCAT GGTGAAAGCG GGCACGACAA CGGACAAGGC CAAGCTGACC GCGCAGCTCG CCAAGGAAAA CTATAAGGGC GTCGCCGGCA CCTATTCGTT CGACGAGTAC GGCGACCTGA AGGGCGCGCC GACCACCGTG TACGTCATCA AGAACGGTTT GCCGACGCCC TACGGCCAGT AA
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Protein sequence | MRRLAMTAAA LMAAGFTLSA SAQVVVTIGH SAPLTGPQAP NGKDNENGAR LAIDELNKSG VTVAGQKVTF KLDSEDDQAD PKIGVQVAQK LVDSGVVAVV GPYNSGVAIP ASRVYNTGNV PMLPVASNPA LTRQGFKNIF RIGASDEQLG GTMGQFAAKT LKAKTAAVID DRTAYGQGVA EQFVKVAKAN GIQIVEQEFT NSSATDFLSI LTTIKAKNPD VIFFGGYAAQ GAPMAKQMRQ RGLRAKLLGG DGICSADMGK VAGEAASIVY CAQGGIALEK TAAGREFLQK YKAAYNIDTQ VYAVSYYDGV KLLADAMVKA GTTTDKAKLT AQLAKENYKG VAGTYSFDEY GDLKGAPTTV YVIKNGLPTP YGQ
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