| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5688 |
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| Symbol | |
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| ID | 6280423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1892111 |
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| End bp | 1892893 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616761 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889404 |
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| Protein GI | 187920373 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTCA AGGACAAGGT CGTGATCGTC ACCGGCGGCT CGCGTGGCAT TGGCCGCGCG
ATAGCGGTTG CGTGCGCCGC CGAAGGCGCG GACGTGGCGA TCAACTACTG GGGCGATAAC
GACGTATCGT ATGGACGCCG CTCCGCGGTC GCGGAAGTGG TCGCCGAAAT CGAGGCGCTC
GGGCGGCGCG TGATTGCGAT CGAGGGCAAC GTCGCCGCGC GCGAAACCGG TCAGCAGTTG
GTGCGCCATA CGGTCGAAGC TTTTGGCAAA GTCGACGTGC TCGCCAGCAA CGCCGGTATT
TGTCCGTTCC ACGCGTTTCT CGACATGCCG CCGGAAGTGC TGGAGTCGAC GGTGGCGGTC
AATCTGAACG GCGCGTTCTA CGTCACGCAA GCCGCCGCGC AACAGATGAA ATTGCAGGGC
ACAGGCGGCG CGATCGTGGC GACGAGTTCG ATCAGCGCGC TAGTGGGCGG TGGCATGCAA
ACGCATTACA CGCCGACCAA GGCCGGCGTG CATTCGCTGA TGCAATCCTG CGCGGTGGCG
TTGGGACCGT ATGGCATTCG CTGCAACTCG GTGATGCCGG GCACCATCGC CACCGACCTG
AATGCGCAAG ACCTCGCCGA CGAAGCGAAA AAAGCCTACT TCGAAAAGCG TATTCCGCTC
GGCAGACTGG GCCGCCCGGA AGATGTCGCC GATTGCGTGA CGTTCCTCGC TTCCGACCGC
GCGCGCTATG TGACGGGCGC GGCGTTGCTG GTGGACGGTG GTCTCTTCGT CAACTTGCAG
TAA
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| Protein sequence | MLLKDKVVIV TGGSRGIGRA IAVACAAEGA DVAINYWGDN DVSYGRRSAV AEVVAEIEAL
GRRVIAIEGN VAARETGQQL VRHTVEAFGK VDVLASNAGI CPFHAFLDMP PEVLESTVAV
NLNGAFYVTQ AAAQQMKLQG TGGAIVATSS ISALVGGGMQ THYTPTKAGV HSLMQSCAVA
LGPYGIRCNS VMPGTIATDL NAQDLADEAK KAYFEKRIPL GRLGRPEDVA DCVTFLASDR
ARYVTGAALL VDGGLFVNLQ
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