Gene Bphyt_5686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5686 
Symbol 
ID6278525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1890624 
End bp1890947 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content56% 
IMG OID642616759 
ProductL-rhamnose 1-epimerase 
Protein accessionYP_001889402 
Protein GI187920371 
COG category[S] Function unknown 
COG ID[COG3254] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02625] L-rhamnose 1-epimerase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAA TCGCTTTCCG GATGGTGCTC AACCCCGGCA TGCGCGAGGA ATACGAACGA 
CGTCATGCGC AAATCTGGCC TGAGCTGGTT GACGCGTTGC ACAACGCCGG CGTGCGCGAC
TACCGGATTT TCTTCGATCC CGATTCGAAT CATCTGTTCG CCATCCTCAC GCGCAACAGC
CATCACACCA TGGACGAATT GCCGCAACTC GATGTAATGC GCAAATGGTG GGACTACATG
GCCGACATCA TGCACACGGG CCCAGATCAC ACGCCTGTAC AGCAGCCGCT CGAACCGGTC
TTCCATTTGA ACTCGCTGAG TTGA
 
Protein sequence
METIAFRMVL NPGMREEYER RHAQIWPELV DALHNAGVRD YRIFFDPDSN HLFAILTRNS 
HHTMDELPQL DVMRKWWDYM ADIMHTGPDH TPVQQPLEPV FHLNSLS