Gene Bphyt_5655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5655 
Symbol 
ID6278554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1860362 
End bp1860859 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID642616729 
Productprotein of unknown function DUF188 
Protein accessionYP_001889372 
Protein GI187920341 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.952909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCT GGGTTGACGC CGACGCCTGC CCCGTCGTGA TCAAGGACAT GCTGTACCGT 
GCCGCGCGCC GCACCAACAC GACGCTGACG CTGGTCGCCA ATTCGTTTCT GCGCGTGCCG
CCGTCGCCGC TGATCCGCGC GATCCAGGTG CCGGCCGGCT TCGACGCCGC CGACGACCTG
ATCGCCGAAC GGGTCGCCGC GGGCGATCTC GTGATCACCG CCGACATCCC GCTCGCCGCC
GCCGTGCTGG CCAAAAACGC GCAGGCGCTC GATCCACGCG GCAACTGGTA CACGCCCGGC
ACGATCGAAG AACGGCTGCG CATGCGCTCG ATGCTCGACC AGCTGCGCGG CAGCGGCGTC
GATACCGGCG GGCCTTCGGC GTTCAGCCAG CGCGACAGCA AAAGCTTCGC GGGGGAACTG
GACCGCTGGC TCTCGCGCCA ACGGCCGCAG CCTGATGCAT CGGCGCCACA ATCTGCCGAC
GAACCGCCCA CCGAATGA
 
Protein sequence
MSIWVDADAC PVVIKDMLYR AARRTNTTLT LVANSFLRVP PSPLIRAIQV PAGFDAADDL 
IAERVAAGDL VITADIPLAA AVLAKNAQAL DPRGNWYTPG TIEERLRMRS MLDQLRGSGV
DTGGPSAFSQ RDSKSFAGEL DRWLSRQRPQ PDASAPQSAD EPPTE