Gene Bphyt_5653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5653 
Symbol 
ID6280007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1858913 
End bp1859686 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID642616727 
Productband 7 protein 
Protein accessionYP_001889370 
Protein GI187920339 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.592895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.980998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTT TCACATTCGG CTTCACCAGC ATCCTGATTC TGCTGGTGGC CGCGCTGGTC 
GCCTCATCGA TACGGATTTT TCGGGAGTAC GAACGCGGCG TCGTGTTCAT GCTCGGGCGT
TTCTGGAAGG TCAAGGGCCC GGGCCTCGTG CTGATCATTC CTATCGTGCA GCAGGCCGTG
CGCATGGATC TGCGCACCGT CGTGTTCGAC GTGCCTCCGC AAGACGTGAT CACGCGCGAC
AACGTCTCGG TGAAGGTCAA CGCAGTGGTG TATTTCCGTG TGGTCGATCC GGAGAAAGCC
GTGATCCAGG TGGCGCGCTA CTTCGAGGCA ACCAGCCAGT TATCGCAGAC GACCTTGCGC
GCGGTGCTCG GCAAGCACGA ACTCGACGAA CTGCTGGCCG ATCGCGAGCA GCTCAATGCC
GATATCCAGA AAGTGCTCGA TGCCCAAACG GACGCGTGGG GCATCAAGGT GTCGATCGTG
GAAATCAAGC ACGTGGATAT CAACGAAACG ATGATTCGCG CGATTGCCCG CCAGGCCGAG
GCCGAGCGCG AGCGGCGCGC CAAGGTGATT CACGCGGAAG GAGAATTGCA GGCCTCGCAG
CACCTGCTGG AAGCGGCGCA GACGCTGTCG CGCCAGCCCC AGGCCATGCA ATTGCGCTAC
CTGCAAACCC TCACGACGAT TGCCGCGGAC AAGAACTCGA CGATCGTCTT CCCGCTGCCG
ATCGACCTGC TGAGCGCTGT ATTGGACCGT TTCAGCAAGC CGTCGGCGCC GTGA
 
Protein sequence
MIGFTFGFTS ILILLVAALV ASSIRIFREY ERGVVFMLGR FWKVKGPGLV LIIPIVQQAV 
RMDLRTVVFD VPPQDVITRD NVSVKVNAVV YFRVVDPEKA VIQVARYFEA TSQLSQTTLR
AVLGKHELDE LLADREQLNA DIQKVLDAQT DAWGIKVSIV EIKHVDINET MIRAIARQAE
AERERRAKVI HAEGELQASQ HLLEAAQTLS RQPQAMQLRY LQTLTTIAAD KNSTIVFPLP
IDLLSAVLDR FSKPSAP