Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5653 |
Symbol | |
ID | 6280007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1858913 |
End bp | 1859686 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642616727 |
Product | band 7 protein |
Protein accession | YP_001889370 |
Protein GI | 187920339 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.592895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.980998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGTT TCACATTCGG CTTCACCAGC ATCCTGATTC TGCTGGTGGC CGCGCTGGTC GCCTCATCGA TACGGATTTT TCGGGAGTAC GAACGCGGCG TCGTGTTCAT GCTCGGGCGT TTCTGGAAGG TCAAGGGCCC GGGCCTCGTG CTGATCATTC CTATCGTGCA GCAGGCCGTG CGCATGGATC TGCGCACCGT CGTGTTCGAC GTGCCTCCGC AAGACGTGAT CACGCGCGAC AACGTCTCGG TGAAGGTCAA CGCAGTGGTG TATTTCCGTG TGGTCGATCC GGAGAAAGCC GTGATCCAGG TGGCGCGCTA CTTCGAGGCA ACCAGCCAGT TATCGCAGAC GACCTTGCGC GCGGTGCTCG GCAAGCACGA ACTCGACGAA CTGCTGGCCG ATCGCGAGCA GCTCAATGCC GATATCCAGA AAGTGCTCGA TGCCCAAACG GACGCGTGGG GCATCAAGGT GTCGATCGTG GAAATCAAGC ACGTGGATAT CAACGAAACG ATGATTCGCG CGATTGCCCG CCAGGCCGAG GCCGAGCGCG AGCGGCGCGC CAAGGTGATT CACGCGGAAG GAGAATTGCA GGCCTCGCAG CACCTGCTGG AAGCGGCGCA GACGCTGTCG CGCCAGCCCC AGGCCATGCA ATTGCGCTAC CTGCAAACCC TCACGACGAT TGCCGCGGAC AAGAACTCGA CGATCGTCTT CCCGCTGCCG ATCGACCTGC TGAGCGCTGT ATTGGACCGT TTCAGCAAGC CGTCGGCGCC GTGA
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Protein sequence | MIGFTFGFTS ILILLVAALV ASSIRIFREY ERGVVFMLGR FWKVKGPGLV LIIPIVQQAV RMDLRTVVFD VPPQDVITRD NVSVKVNAVV YFRVVDPEKA VIQVARYFEA TSQLSQTTLR AVLGKHELDE LLADREQLNA DIQKVLDAQT DAWGIKVSIV EIKHVDINET MIRAIARQAE AERERRAKVI HAEGELQASQ HLLEAAQTLS RQPQAMQLRY LQTLTTIAAD KNSTIVFPLP IDLLSAVLDR FSKPSAP
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