| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5648 |
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| Symbol | |
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| ID | 6278227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1851390 |
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| End bp | 1852901 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616722 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001889365 |
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| Protein GI | 187920334 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA ATGCAGCCGT TGCCACCGTC AAGTTGCTGA TCAACGGCGA GTTCGTCGAG
TCGAAGACCA CCGAATGGCG CGACATCGTC AATCCCGCCA CGCAAGAGGT GCTGGCGCGC
GTGCCGTTCG CCACCGCCGA CGAAGTGAAC GAAGCCATCC GTTCCGCCCA CGCCGCGTTC
AAGACCTGGA AAGACACGCC GATCGGCGCG CGCATGCGCA TCATGCTGAA GTACCAGGCG
CTGATTCGCG AGCATTCGCC GCGTATCGCC AGGACCTTGA GCGCGGAGCA GGGCAAGACG
ATTCCCGATG CCGAAGGCGA CATCTTTCGC GGCCTCGAAG TGGTCGAGCA TGCATGCTCG
ATCGGCACGT TGCAGCAGGG CGAATTCGCG GAGAACGTGG CGGGCGGCGT GGATACCTAC
ACGCTGCGCC AACCGATCGG CGTATGCGCC GGCATCACTC CGTTCAACTT CCCGGCGATG
ATCCCGCTGT GGATGTTCCC GATGGCGATC GTCTGCGGCA ATACCTTCGT GCTGAAGCCT
TCCGAGCAGG ACCCGCTTTC GACCATGCAA CTGGTCGAAC TCGCGCTCGA AGCCGGCGTG
CCGAAGGGTG TGCTGAATGT TGTGCACGGT GGCAAGGAGG TGGTCGACGC GCTCTGCACG
CACGAACTCG TCAAGGCCGT TTCGTTCGTC GGCTCGACGG CGGTCGGTAC GCACGTGTAC
CGCCTCGGCA GCGAACACGG CAAGCGCGTG CAATCGATGA TGGGCGCGAA GAACCACGCG
GTGGTGCTGC CCGATGCGAA CCGCGAGCAG ACCTTGAATG CGCTTGCCGG CGCTGGTTTT
GGTGCGGCGG GTCAGCGCTG CATGGCGACC TCGGTGGTCG TGCTGGTGGG CGCCGCGCAG
CAATGGTTGC CGGATCTGGT CGCCAAGGCC AGGACGTTGA AAGTCAACGC GGGCAACGAA
CCGAACACGG ACATCGGCCC GGTGGTTTCG CGCGCGGCGA AGCAGCGCAT TCTCGGCTTG
ATCGAAGCGG GCGTGAAAGA AGGCGCGACA CTCGCGCTCG ATGGCCGCGA CATCAAAGTG
CCGGGCTACG AGCAAGGCAA CTTCATCGGC CCGACGGTTT TTTCCGATGT CACCACCGAG
ATGGAAATCT ATCGCCAGGA GATTTTCGGC CCGGTGCTGG TGGTGCTGAA CGCGGCCACG
CTCGATGACG CCATCGCGCT GGTCAACCGC AATCCGTTCG GCAACGGCGT GGGCCTGTTC
ACGCAGAGCG GCGCGGCGGC GCGCAAGTTC CAGAGCGAGA TCGATATCGG CCAGGTCGGC
ATCAACATTC CGATTCCGGT GCCGGTGCCG TCCTTCAGCT TTACCGGCTC GCGCGGCTCG
AAACTCGGCG ACCTCGGCCC CTATGGCAAA CAGGTCGTGC AGTTCTACAC GCAGACCAAG
ACCGTCACCG CGCGCTGGTT CGACGACGAC ACCGTCAACG ACGGCGTGAA CACGACCATC
AGCCTGCGCT GA
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| Protein sequence | MSANAAVATV KLLINGEFVE SKTTEWRDIV NPATQEVLAR VPFATADEVN EAIRSAHAAF
KTWKDTPIGA RMRIMLKYQA LIREHSPRIA RTLSAEQGKT IPDAEGDIFR GLEVVEHACS
IGTLQQGEFA ENVAGGVDTY TLRQPIGVCA GITPFNFPAM IPLWMFPMAI VCGNTFVLKP
SEQDPLSTMQ LVELALEAGV PKGVLNVVHG GKEVVDALCT HELVKAVSFV GSTAVGTHVY
RLGSEHGKRV QSMMGAKNHA VVLPDANREQ TLNALAGAGF GAAGQRCMAT SVVVLVGAAQ
QWLPDLVAKA RTLKVNAGNE PNTDIGPVVS RAAKQRILGL IEAGVKEGAT LALDGRDIKV
PGYEQGNFIG PTVFSDVTTE MEIYRQEIFG PVLVVLNAAT LDDAIALVNR NPFGNGVGLF
TQSGAAARKF QSEIDIGQVG INIPIPVPVP SFSFTGSRGS KLGDLGPYGK QVVQFYTQTK
TVTARWFDDD TVNDGVNTTI SLR
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