Gene Bphyt_5645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5645 
Symbol 
ID6280250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1848491 
End bp1849639 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID642616719 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001889362 
Protein GI187920331 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.789263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT TGCAAAGCGT CGCGCACGAT ACGAGCCTCG AAGCGGAACG CGAGATCCTG 
TTTCGCGTGG TGAATCGCGT GGCGATCATC ACGCTGAACC GGCCGGCCGC GCTCAATGCG
CTTTCGCACG CGATGGTGCG CGAACTCGCC GTGCTGGTCG AACATTGCCG CACCGACGAC
GGCATCGTCG CGCTCGTGCT GAAAGGCGCG GGCGCCAAGG GTTTCTGCGC CGGCGGCGAC
GTGCGCGAAG TGCAGCGGCT CGCGAAGAAC AACGACAGCC GCTGGCTCGC GTTCTTCGTC
GACGAATATC GGCTCGACTA TGCGCTTCAC ACGTTTCCGA AGCCGGTGGT CGCTTTGCTC
GACGGCATTG CGATGGGCGG CGGCATGGGG CTCGGCCAGG GAGCGCGGCT GCGCATCGTG
ACCGAGCGCA GCAAGATCGC CATGCCGGAG ACGCGCATCG GCTTTCTGCC GGACGTCGGC
GCGACGCGTT TTCTCAGCGT GATGCCGGCG GAGCTCGAGT TGTATGTCGG GCTGACCGGC
GCGACCTTGT CCGGCGCCGA CGCATTGCGG CTGCAACTGG CGGATCTGTG CGTGCCGGCC
GAATGGCTCG CCAGTTTCGA AGAGCGTTTG CAGCGCATGC CGCTCGAAGG CGATCTGATG
GCGGCCTTGC GCGGCGTGTT CGAGCCGCCG TGCAATATCA TTCCGCACGC GCCGCTGGCG
GCGTTCACTC AACTGATCTT GCGGCATTTC GATCGGCGTT CGAGCATCGA CCGGATGGTC
GCGACGGTGC GGCACGATTT GTTGCGCGAG CCGCCGCGCG AGGTGAAGCA GTGGTTGCAG
TCCACCTACG ACGCGCTGAC CGGTCATTCG CCCACCATGC TGTACGTCAC GCGTGAGGCG
CTGTTGCGCG GCCGGCAGAT GACCCTGGCG GAATGCTTCC GCATGGAACT CGGCATCGTC
AAGCGCGTGA TCGAGGAGGG TGACTTCTGC GAAGGCGTGC GGGCCCAGTT GATCGACAAG
GATCGCAAAG CCCGCTGGGC GCCCGCCACG CTCGCCGAGG TGCGGCCGGA GCGCGTCAGA
CATTTTCTCG CTTCGCCGTG GAAGAGCGAC GCACATCCGC TGGCTGCGTT GGGCGCGGAG
CAGGGCTGA
 
Protein sequence
MSALQSVAHD TSLEAEREIL FRVVNRVAII TLNRPAALNA LSHAMVRELA VLVEHCRTDD 
GIVALVLKGA GAKGFCAGGD VREVQRLAKN NDSRWLAFFV DEYRLDYALH TFPKPVVALL
DGIAMGGGMG LGQGARLRIV TERSKIAMPE TRIGFLPDVG ATRFLSVMPA ELELYVGLTG
ATLSGADALR LQLADLCVPA EWLASFEERL QRMPLEGDLM AALRGVFEPP CNIIPHAPLA
AFTQLILRHF DRRSSIDRMV ATVRHDLLRE PPREVKQWLQ STYDALTGHS PTMLYVTREA
LLRGRQMTLA ECFRMELGIV KRVIEEGDFC EGVRAQLIDK DRKARWAPAT LAEVRPERVR
HFLASPWKSD AHPLAALGAE QG