| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5622 |
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| Symbol | |
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| ID | 6278032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1824575 |
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| End bp | 1825882 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616696 |
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| Product | General substrate transporter |
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| Protein accession | YP_001889339 |
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| Protein GI | 187920308 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.335897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAA CGACACCCGC CGAACTCGAC GCTGCCACGC GTCCATTACG TCGCCGCAGC
GCGCTGCGCT CGATTGCGGG CGGCTCCATC GGCAATCTGA TCGAGTGGTA CGACTTTCAC
GTTTATACGA CTTTTTCCAT TTTCTTCGCG GCTTCGTTCT TTCCGCGTGA GAACCGCACC
ATTCAGTTAC TTTCGACGGC GGCGATCTTC GCCATCGGCT TTCTGCTGCG GCCGGTCGGA
AGCTGGCTAA TCGGCCTCTA TGCCGATCGG CGCGGACGCC GCTCCGCCCT CACGCTGTCC
GTCATCCTCA TGTGCGCGGG CTCACTCGCC ATCGGCCTGT GTCCCACCTA CCCGCAGATC
GGCATGGCCG CGCCGCTCGT GTTGTTGCTC GCGCGGCTCG TACAGGGCTT TTCGCTCGGC
GGCGAGTACG GCGCGAGTTC GGTGTATCTC AGCGAAATCG CACGGCCCGG TCATCGCGGC
TTCTACAGCA GCTTCCACTA CGTCACGCTG ATTCTCGGCC AGTTGCTCGC CACGCTCGTG
CAGGTCGTGT TGCAGGCGCT GATTCCGCGT GCGGAACTGA TCGACTGGGG CTGGCGCGTG
CCGTTCATCA CCGGCGCGGC ACTCGCGCTA GTGGCGTGGT GGGTGCGTCG CAATATCGAT
GAAACCCCGG ACTTCCGCGC GCTCGATGAG AAGGACAAGC GCGGCGTGTC GCTGTCGGCG
TTGCGCGAGC ACTGGCGGCC CGTTCTGCTC GTGTTCGGGC TGACCACGGG CGGCACGCTC
GCGTTCTTCA CCTACACGGT CTATATGCAC AACTACCTCG TGAATACAGT CGGGTTGAGC
GCACAGACGA GCGCGTGGCT TTCGCTGTCT ACGCTAACGC TGTTCATGGT TGTGCAGCCG
TTCTTCGGCG CGCTGTCGGA TCGTATCGGG CGACGCCCGC TGTTGTTGTG GTTCGGTATT
GGCGGCACGT TCGGCACCTG GCCGCTGCTG ACGGCGCTCG CGCACACACA TAGCGCAACA
ACTGCATTCC TGCTGCTCGC GCTTGCACTG ATGATCGTCT CCGGCTACAC GTCCGTGTGC
TCCGTTATGA AGGCCCAACT GTTTCCCGCT CGGCTGCGAG CGCTGGGCGT GGGCGTACCG
TATGCCATCG CGACGGCTGT ATTCGGCGGC ACGGCCAGTT ATGCCGGGCT CTGGTTCAAG
AGCATCGGCC ATGAAAGCGG TTTCTATCTG TATGCGTCGG CATGCATCGG CTGCACGCTG
ATCGCCACTT TGAGCCTGCG CAGCAGCGAC ATGAAAATGG AGTCGTAA
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| Protein sequence | MHETTPAELD AATRPLRRRS ALRSIAGGSI GNLIEWYDFH VYTTFSIFFA ASFFPRENRT
IQLLSTAAIF AIGFLLRPVG SWLIGLYADR RGRRSALTLS VILMCAGSLA IGLCPTYPQI
GMAAPLVLLL ARLVQGFSLG GEYGASSVYL SEIARPGHRG FYSSFHYVTL ILGQLLATLV
QVVLQALIPR AELIDWGWRV PFITGAALAL VAWWVRRNID ETPDFRALDE KDKRGVSLSA
LREHWRPVLL VFGLTTGGTL AFFTYTVYMH NYLVNTVGLS AQTSAWLSLS TLTLFMVVQP
FFGALSDRIG RRPLLLWFGI GGTFGTWPLL TALAHTHSAT TAFLLLALAL MIVSGYTSVC
SVMKAQLFPA RLRALGVGVP YAIATAVFGG TASYAGLWFK SIGHESGFYL YASACIGCTL
IATLSLRSSD MKMES
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