| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5608 |
|---|
| Symbol | |
|---|
| ID | 6278392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1811400 |
|---|
| End bp | 1811972 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642616685 |
|---|
| Product | hemerythrin HHE cation binding domain protein |
|---|
| Protein accession | YP_001889328 |
|---|
| Protein GI | 187920297 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3945] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.272772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAT GGGGGCGGCG AGGCGCCGTT GAGGTGATTC TGAGAGAGCA TGAGCAGTTG
GCGACTGTGA ACCGGGGAAT GCAGGAGTTC GTCAGCACGC TGGAAATAGG GAGTGGTACA
CAGGACCTCG TCATACTCCG AGCCATGCTT TATTACATCC GCGAATATCC GCAGCAGGTT
CATCATCCGA AAGAGGATCG GTTCCTTTTT GTCCGGTTGC GGGAACGTAC GCATGAACTC
GATGAGGTCA TCGACAAACT CGAAGGCCAA CATGTTCAGG GTGATATACA GGTACGGAAA
CTGGAACACG CGCTGACTCG TTACGAGTTG GGCGGAGGCA CTACGTGCGC GTCGCTCAAG
TGTCTGGTGG ATGAGTACGC AAATTTCTCG TCTGATCACA GGCGAATGGA GGAAGATCTG
ATCTTGCCCG CTGCCCGGCG ATTTCTCACG AAAGATGACT GGGACGAACT CGACGCTGCG
TTCGGTGCGA ACCGCGACCC GTTTGACGGA GTCAAGCTTG AAGAAGATTT GGATAAGCTG
TTCAATATGA TTGTCACGAC TGTGCCACGG TAG
|
|---|
| Protein sequence | MSAWGRRGAV EVILREHEQL ATVNRGMQEF VSTLEIGSGT QDLVILRAML YYIREYPQQV
HHPKEDRFLF VRLRERTHEL DEVIDKLEGQ HVQGDIQVRK LEHALTRYEL GGGTTCASLK
CLVDEYANFS SDHRRMEEDL ILPAARRFLT KDDWDELDAA FGANRDPFDG VKLEEDLDKL
FNMIVTTVPR
|
|---|
| |